RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 NLRP6P59044 892 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ZC3H15Q8WU90 426 aaKnown RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 CAVIN3Q969G5 261 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ZKSCAN4Q969J2 545 aaPredicted RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MCUR1Q96AQ8 359 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC43Q96MW1 224 aaKnown RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ANKZF1Q9H8Y5 726 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 L1RE1Q9UN81 338 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 SLC5A1P13866 664 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 LIFRP42702 1097 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 NCAPH2Q6IBW4 605 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ITFG2Q969R8 447 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC68Q9H2F9 335 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 NDUFA13Q9P0J0 144 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MAP3K2Q9Y2U5 619 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MYH1P12882 1939 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MYH4Q9Y623 1939 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 CUL3Q13618 768 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 KRT71Q3SY84 523 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ZBTB10Q96DT7 871 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 SENP1Q9P0U3 644 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 PPP4R3CPQ6ZMV5 832 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 PI4K2BQ8TCG2 481 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MRGBPQ9NV56 204 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 AATFQ9NY61 560 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 SETD1BQ9UPS6 1966 aaKnown RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 GHRP10912 638 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 CNGA1P29973 690 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 SFSWAPQ12872 951 aaKnown RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 NAA35Q5VZE5 725 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 HIBCHQ6NVY1 386 aaPredicted RBP7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MFN1Q8IWA4 741 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 HAUS2Q9NVX0 235 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 STRN3Q13033 797 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 RPS6KA1Q15418 735 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 SFMBT2Q5VUG0 894 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 CYB5D1Q6P9G0 228 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 TRIM42Q8IWZ5 723 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 PROM2Q8N271 834 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ZWINTO95229 277 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 NDUFA10O95299 355 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 ADGRG1Q9Y653 693 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 COL15A1P39059 1388 aa7.22□□□□□ -1.25
TRIM38-201ENST00000357085 MED1Q15648 1581 aaPredicted RBP7.21□□□□□ -1.25
TRIM38-201ENST00000357085 PPFIA2O75334 1257 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 TNNI3KQ59H18 835 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 USPL1Q5W0Q7 1092 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 DNAI2Q9GZS0 605 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 USP44Q9H0E7 712 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 FPGT-TNNI3KV9GXZ4 949 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 IGSF1Q8N6C5 1336 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 CES2O00748 559 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 AHCYL1O43865 530 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 NOL3O60936 208 aaKnown RBP7.21□□□□□ -1.25
TRIM38-201ENST00000357085 RBL2Q08999 1139 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 KRT24Q2M2I5 525 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 C6orf118Q5T5N4 469 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 KRT40Q6A162 431 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 MICU3Q86XE3 530 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 UNC5CLQ8IV45 518 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 FAM96AQ9H5X1 160 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 SH3GLB2Q9NR46 395 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 PASKQ96RG2 1323 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 MYH3P11055 1940 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 USP31Q70CQ4 1352 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 MYH11P35749 1972 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 A0A1W2PQJ5 194 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 PPP1R37O75864 691 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 SKOR1P84550 965 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 TRIM65Q6PJ69 517 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 NME9Q86XW9 330 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 ZNF513Q8N8E2 541 aaPredicted RBP7.21□□□□□ -1.25
TRIM38-201ENST00000357085 ACRBPQ8NEB7 543 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 FOXP3Q9BZS1 431 aa7.21□□□□□ -1.25
TRIM38-201ENST00000357085 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.21□□□□□ -1.25
TRIM38-201ENST00000357085 A0A087WWV3 80 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 CETN3O15182 167 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.26
TRIM38-201ENST00000357085 ZC3H6P61129 1189 aaKnown RBP7.21□□□□□ -1.26
TRIM38-201ENST00000357085 IFIT5Q13325 482 aaKnown RBP7.21□□□□□ -1.26
TRIM38-201ENST00000357085 ARHGEF18Q6ZSZ5 1173 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 MREGQ8N565 214 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 SYN2Q92777 582 aaPredicted RBP7.21□□□□□ -1.26
TRIM38-201ENST00000357085 FGD4Q96M96 766 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 USP40Q9NVE5 1235 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 GOLGA8QA0A0J9YX86 632 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 GSTTP1A0A1W2PQM5 241 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 GOLGA8OA6NCC3 632 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 GOLGA8NF8WBI6 632 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 DDAH1O94760 285 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 CFAP57Q96MR6 1250 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 IQCGQ9H095 443 aaKnown RBP7.21□□□□□ -1.26
TRIM38-201ENST00000357085 IFIT3O14879 490 aaKnown RBP7.21□□□□□ -1.26
TRIM38-201ENST00000357085 TAF5LO75529 589 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 GFPT2O94808 682 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms