RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KLHDC4Q8TBB5 520 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 ABHD8Q96I13 439 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 CDV3Q9UKY7 258 aaKnown RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 RAD50Q92878 1312 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 PANK4Q9NVE7 773 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 SMCO2A6NFE2 343 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 IDI1Q13907 227 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 TRIM14Q14142 442 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 ARMCX5Q6P1M9 558 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 Q9H521 79 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 ANGEL1Q9UNK9 670 aaKnown RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 GLE1Q53GS7 698 aaKnown RBP18.81■□□□□ 0.6
COL27A1-201ENST00000356083 DNAJC8O75937 253 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-201ENST00000356083 NSUN2Q08J23 767 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL27A1-201ENST00000356083 PAK2Q13177 524 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 FBXL13Q8NEE6 735 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 GLT8D2Q9H1C3 349 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 TNNQ9UQP3 1299 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 TFAP4Q01664 338 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL27A1-201ENST00000356083 SYTL2Q9HCH5 934 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 SART1O43290 800 aaKnown RBP18.81■□□□□ 0.6
COL27A1-201ENST00000356083 MFSD14BQ5SR56 506 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 RNF139Q8WU17 664 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 CDKL2Q92772 493 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-201ENST00000356083 ZNF202O95125 648 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 POSTNQ15063 836 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 CHURC1Q8WUH1 139 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 INTUQ9ULD6 942 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 DAAM1Q9Y4D1 1078 aa18.81■□□□□ 0.6
COL27A1-201ENST00000356083 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-201ENST00000356083 PI4K2BQ8TCG2 481 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 KLHL14Q9P2G3 628 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 PPP1R9AQ9ULJ8 1098 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 MAIP1Q8WWC4 291 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 PIDD1Q9HB75 910 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 HECW1Q76N89 1606 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 SRGAP2BP0DMP2 458 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 CLCA2Q9UQC9 943 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 THOC5Q13769 683 aaKnown RBP18.8■□□□□ 0.6
COL27A1-201ENST00000356083 RWDD4Q6NW29 188 aaKnown RBP18.8■□□□□ 0.6
COL27A1-201ENST00000356083 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.8■□□□□ 0.62e-6■■■■■ 34.4
COL27A1-201ENST00000356083 XAGE2Q96GT9 111 aa18.8■□□□□ 0.6
COL27A1-201ENST00000356083 CERKLQ49MI3 558 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-201ENST00000356083 FAM182BQ5T319 152 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 RPSAP08865 295 aaKnown RBP18.79■□□□□ 0.6
COL27A1-201ENST00000356083 ADKP55263 362 aaKnown RBP18.79■□□□□ 0.6
COL27A1-201ENST00000356083 STAG1Q8WVM7 1258 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 ANKRD36BP1Q96IX9 119 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 PSTPIP2Q9H939 334 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 PLCH2O75038 1416 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 UBXN2AP68543 259 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 RASIP1Q5U651 963 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 ZSCAN9O15535 394 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-201ENST00000356083 FRA10AC1Q70Z53 315 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 USP21Q9UK80 565 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 CD109Q6YHK3 1445 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 SETSIPP0DME0 302 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 PTK2BQ14289 1009 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 NONOQ15233 471 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL27A1-201ENST00000356083 ARHGAP6O43182 974 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 FANCCQ00597 558 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 ABCC5O15440 1437 aa18.79■□□□□ 0.6
COL27A1-201ENST00000356083 STX1BP61266 288 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 ART3Q13508 389 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 FASTKD5Q7L8L6 764 aaKnown RBP18.78■□□□□ 0.6
COL27A1-201ENST00000356083 ATF2P15336 505 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 KIF19Q2TAC6 998 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 LRRC8CQ8TDW0 803 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 WDR91A4D1P6 747 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 NCF2P19878 526 aaPredicted RBP18.78■□□□□ 0.6
COL27A1-201ENST00000356083 TMEM247A6NEH6 219 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 ATP8B2P98198 1209 aa18.78■□□□□ 0.6
COL27A1-201ENST00000356083 DDX25Q9UHL0 483 aaKnown RBP18.78■□□□□ 0.6
COL27A1-201ENST00000356083 BAG6P46379 1132 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 MECOMQ03112 1051 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 SCYL3Q8IZE3 742 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 ZRANB2O95218 330 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL27A1-201ENST00000356083 RNF168Q8IYW5 571 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-201ENST00000356083 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 PDE8AO60658 829 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 ANXA13P27216 316 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 MESDQ14696 234 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 ACCSLQ4AC99 568 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 PHLDB3Q6NSJ2 640 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 FAN1Q9Y2M0 1017 aa18.77■□□□□ 0.6
COL27A1-201ENST00000356083 TFAMQ00059 246 aaKnown RBP18.77■□□□□ 0.59
COL27A1-201ENST00000356083 NXF1Q9UBU9 619 aaKnown RBP18.77■□□□□ 0.59
COL27A1-201ENST00000356083 PFDN1O60925 122 aa18.77■□□□□ 0.59
COL27A1-201ENST00000356083 OCRLQ01968 901 aa18.77■□□□□ 0.59
COL27A1-201ENST00000356083 SARS2Q9NP81 518 aaKnown RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms