RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
DDX55-202ENST00000354291 SLC9A7Q96T83 725 aa19.01■□□□□ 0.63
DDX55-202ENST00000354291 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.01■□□□□ 0.63
DDX55-202ENST00000354291 FTOQ9C0B1 505 aaKnown RBP eCLIP19.01■□□□□ 0.63
DDX55-202ENST00000354291 BRWD1Q9NSI6 2320 aa19.01■□□□□ 0.63
DDX55-202ENST00000354291 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
DDX55-202ENST00000354291 LRRC37A2A6NM11 1700 aa19■□□□□ 0.63
DDX55-202ENST00000354291 WDFY4Q6ZS81 3184 aa19■□□□□ 0.63
DDX55-202ENST00000354291 EEPD1Q7L9B9 569 aa19■□□□□ 0.63
DDX55-202ENST00000354291 HERC6Q8IVU3 1022 aa19■□□□□ 0.63
DDX55-202ENST00000354291 GJD3Q8N144 294 aa19■□□□□ 0.63
DDX55-202ENST00000354291 STK11IPQ8N1F8 1099 aa19■□□□□ 0.63
DDX55-202ENST00000354291 PHOSPHO2Q8TCD6 241 aa19■□□□□ 0.63
DDX55-202ENST00000354291 SLC38A10Q9HBR0 1119 aa19■□□□□ 0.63
DDX55-202ENST00000354291 IL1RAPL2Q9NP60 686 aa19■□□□□ 0.63
DDX55-202ENST00000354291 PDGFCQ9NRA1 345 aa19■□□□□ 0.63
DDX55-202ENST00000354291 EXOC6BQ9Y2D4 811 aa19■□□□□ 0.63
DDX55-202ENST00000354291 DDX49Q9Y6V7 483 aaKnown RBP19■□□□□ 0.63
DDX55-202ENST00000354291 ASB14A6NK59 587 aa18.99■□□□□ 0.63
DDX55-202ENST00000354291 SUPT20HL2P0C7V6 817 aa18.99■□□□□ 0.63
DDX55-202ENST00000354291 SSTR3P32745 418 aaPredicted RBP18.99■□□□□ 0.63
DDX55-202ENST00000354291 CSPP1Q1MSJ5 1256 aa18.99■□□□□ 0.63
DDX55-202ENST00000354291 TMEM63BQ5T3F8 832 aa18.99■□□□□ 0.63
DDX55-202ENST00000354291 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.99■□□□□ 0.63
DDX55-202ENST00000354291 SPRED2Q7Z698 418 aa18.99■□□□□ 0.63
DDX55-202ENST00000354291 CLIP2Q9UDT6 1046 aa18.99■□□□□ 0.63
DDX55-202ENST00000354291 SOWAHBA6NEL2 793 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 LPXNO60711 386 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 IQSEC1Q6DN90 963 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 FAM133AQ8N9E0 248 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 SNX27Q96L92 541 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 COG6Q9Y2V7 657 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 SLC4A4Q9Y6R1 1079 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 MYH8P13535 1937 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 TNKSO95271 1327 aa18.98■□□□□ 0.63
DDX55-202ENST00000354291 ERC1Q8IUD2 1116 aa18.97■□□□□ 0.63
DDX55-202ENST00000354291 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
DDX55-202ENST00000354291 RETREG2Q8NC44 543 aa18.97■□□□□ 0.63
DDX55-202ENST00000354291 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
DDX55-202ENST00000354291 NYAP2Q9P242 653 aa18.97■□□□□ 0.63
DDX55-202ENST00000354291 FEM1BQ9UK73 627 aa18.97■□□□□ 0.63
DDX55-202ENST00000354291 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
DDX55-202ENST00000354291 ALADP13716 330 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 ADD2P35612 726 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 NHLH1Q02575 133 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 FAM47CQ5HY64 1035 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 KIAA1211Q6ZU35 1233 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 FBXO16Q8IX29 292 aaPredicted RBP18.96■□□□□ 0.63
DDX55-202ENST00000354291 FAM178BQ8IXR5 827 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 GDPD5Q8WTR4 605 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 ACAD9Q9H845 621 aa18.96■□□□□ 0.63
DDX55-202ENST00000354291 MYL3P08590 195 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 RFC2P35250 354 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 OAZ1P54368 228 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 TAPT1Q6NXT6 567 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 PPP1R13LQ8WUF5 828 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 ZBED2Q9BTP6 218 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 UBE2ZQ9H832 354 aaPredicted RBP18.95■□□□□ 0.62
DDX55-202ENST00000354291 A1CFQ9NQ94 594 aaKnown RBP18.95■□□□□ 0.62
DDX55-202ENST00000354291 MTUS1Q9ULD2 1270 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 Q9Y3F1 56 aa18.95■□□□□ 0.62
DDX55-202ENST00000354291 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
DDX55-202ENST00000354291 LCHNA4D1U4 455 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 CHGBP05060 677 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 IQCF3P0C7M6 154 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 KCNA5P22460 613 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 FBXL18Q96ME1 805 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
DDX55-202ENST00000354291 RNF146Q9NTX7 359 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 LMCD1Q9NZU5 365 aa18.94■□□□□ 0.62
DDX55-202ENST00000354291 RLBP1P12271 317 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 RASA1P20936 1047 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 KCNJ6P48051 423 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 TMCO2Q7Z6W1 182 aaPredicted RBP18.93■□□□□ 0.62
DDX55-202ENST00000354291 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.93■□□□□ 0.62
DDX55-202ENST00000354291 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDX55-202ENST00000354291 CHMP4CQ96CF2 233 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.93■□□□□ 0.628e-8■■■□□ 15.3
DDX55-202ENST00000354291 BOLA2Q9H3K6 86 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 POLR3EQ9NVU0 708 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 PAG1Q9NWQ8 432 aa18.93■□□□□ 0.62
DDX55-202ENST00000354291 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.92■□□□□ 0.62
DDX55-202ENST00000354291 MINDY4BA8MYZ0 360 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
DDX55-202ENST00000354291 MS4A1P11836 297 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 ALAS1P13196 640 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 IL9P15248 144 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 NBPF20Q3BBV1 942 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 LEXMQ3ZCV2 418 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 CLASRPQ8N2M8 674 aaKnown RBP18.92■□□□□ 0.62
DDX55-202ENST00000354291 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 TRERF1Q96PN7 1200 aa18.92■□□□□ 0.62
DDX55-202ENST00000354291 SCN5AQ14524 2016 aa18.91■□□□□ 0.62
DDX55-202ENST00000354291 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
DDX55-202ENST00000354291 BMP3P12645 472 aa18.91■□□□□ 0.62
DDX55-202ENST00000354291 PURAQ00577 322 aaKnown RBP18.91■□□□□ 0.62
DDX55-202ENST00000354291 IKQ13123 557 aaPredicted RBP18.91■□□□□ 0.62
DDX55-202ENST00000354291 PTCRAQ6ISU1 281 aaPredicted RBP18.91■□□□□ 0.62
DDX55-202ENST00000354291 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms