RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SPECC1Q5M775 1068 aa23.4■■□□□ 1.34
TRIM4-202ENST00000354241 CDCA5Q96FF9 252 aa23.4■■□□□ 1.34
TRIM4-202ENST00000354241 TANGO6Q9C0B7 1094 aa23.4■■□□□ 1.34
TRIM4-202ENST00000354241 POTECB2RU33 542 aa23.39■■□□□ 1.34
TRIM4-202ENST00000354241 VCAM1P19320 739 aa23.39■■□□□ 1.34
TRIM4-202ENST00000354241 CLK2P49760 499 aaKnown RBP23.39■■□□□ 1.34
TRIM4-202ENST00000354241 MAP3K9P80192 1104 aa23.39■■□□□ 1.34
TRIM4-202ENST00000354241 LETM2Q2VYF4 491 aa23.39■■□□□ 1.34
TRIM4-202ENST00000354241 NEK8Q86SG6 692 aa23.39■■□□□ 1.34
TRIM4-202ENST00000354241 NF2P35240 595 aa23.39■■□□□ 1.33
TRIM4-202ENST00000354241 FERMT2Q96AC1 680 aa23.39■■□□□ 1.33
TRIM4-202ENST00000354241 SLF1Q9BQI6 1058 aa23.39■■□□□ 1.33
TRIM4-202ENST00000354241 CSRNP2Q9H175 543 aa23.39■■□□□ 1.33
TRIM4-202ENST00000354241 SMCHD1A6NHR9 2005 aa23.39■■□□□ 1.33
TRIM4-202ENST00000354241 PAPPA2Q9BXP8 1791 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L15C9J2P7 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L13C9JLJ4 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L11C9JVI0 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L18D6R9N7 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L22D6RA61 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L17D6RBQ6 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L19D6RCP7 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L20D6RJB6 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 CCNT1O60563 726 aaKnown RBP23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L24Q0WX57 530 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 TRAF1Q13077 416 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 VGLL4Q14135 290 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 USP17L6PQ6QN14 398 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.38■■□□□ 1.33
TRIM4-202ENST00000354241 CKAP2LQ8IYA6 745 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 ZNF579Q8NAF0 562 aaKnown RBP23.38■■□□□ 1.33
TRIM4-202ENST00000354241 RPAP3Q9H6T3 665 aaPredicted RBP23.38■■□□□ 1.33
TRIM4-202ENST00000354241 FAM13BQ9NYF5 915 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 HPSEQ9Y251 543 aa23.38■■□□□ 1.33
TRIM4-202ENST00000354241 PNMA8AQ86V59 439 aaPredicted RBP23.37■■□□□ 1.33
TRIM4-202ENST00000354241 TSPY26PQ9H489 355 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 SNCAIPQ9Y6H5 919 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 ZNF202O95125 648 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 SYKP43405 635 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 IREB2P48200 963 aaKnown RBP23.37■■□□□ 1.33
TRIM4-202ENST00000354241 HMGCS2P54868 508 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 PRPF38AQ8NAV1 312 aaKnown RBP23.37■■□□□ 1.33
TRIM4-202ENST00000354241 CLEC11AQ9Y240 323 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 CSADQ9Y600 493 aa23.37■■□□□ 1.33
TRIM4-202ENST00000354241 MYH7BA7E2Y1 1941 aa23.36■■□□□ 1.33
TRIM4-202ENST00000354241 FAM237AA0A1B0GTK4 181 aa23.36■■□□□ 1.33
TRIM4-202ENST00000354241 VWA3AA6NCI4 1184 aa23.36■■□□□ 1.33
TRIM4-202ENST00000354241 FLOT1O75955 427 aa23.36■■□□□ 1.33
TRIM4-202ENST00000354241 C4orf32Q8N8J7 132 aa23.36■■□□□ 1.33
TRIM4-202ENST00000354241 C19orf81C9J6K1 198 aa23.35■■□□□ 1.33
TRIM4-202ENST00000354241 TTLL12Q14166 644 aaPredicted RBP23.35■■□□□ 1.33
TRIM4-202ENST00000354241 KCNH3Q9ULD8 1083 aa23.35■■□□□ 1.33
TRIM4-202ENST00000354241 PARP14Q460N5 1801 aa23.35■■□□□ 1.33
TRIM4-202ENST00000354241 CTAGE5O15320 804 aa23.35■■□□□ 1.33
TRIM4-202ENST00000354241 L1TD1Q5T7N2 865 aaKnown RBP23.35■■□□□ 1.33
TRIM4-202ENST00000354241 TMEM60Q9H2L4 133 aa23.35■■□□□ 1.33
TRIM4-202ENST00000354241 AFG3L2Q9Y4W6 797 aa23.35■■□□□ 1.33
TRIM4-202ENST00000354241 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.34■■□□□ 1.33
TRIM4-202ENST00000354241 MEIS2O14770 477 aa23.34■■□□□ 1.33
TRIM4-202ENST00000354241 ARL6IP4Q66PJ3 421 aaKnown RBP23.34■■□□□ 1.33
TRIM4-202ENST00000354241 RBM43Q6ZSC3 357 aaKnown RBP23.34■■□□□ 1.33
TRIM4-202ENST00000354241 SDF4Q9BRK5 362 aa23.34■■□□□ 1.33
TRIM4-202ENST00000354241 GRPEL1Q9HAV7 217 aa23.34■■□□□ 1.33
TRIM4-202ENST00000354241 TMOD4Q9NZQ9 345 aa23.34■■□□□ 1.33
TRIM4-202ENST00000354241 SOCS7O14512 581 aa23.33■■□□□ 1.33
TRIM4-202ENST00000354241 C12orf42Q96LP6 360 aa23.33■■□□□ 1.33
TRIM4-202ENST00000354241 OPLAHO14841 1288 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 NEMFO60524 1076 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 AP3B2Q13367 1082 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 IL17AQ16552 155 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 USP49Q70CQ1 688 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 MOB2Q70IA6 237 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 LDHDQ86WU2 507 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 ANO3Q9BYT9 981 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 PPP1R9AQ9ULJ8 1098 aa23.33■■□□□ 1.32
TRIM4-202ENST00000354241 LAD1O00515 517 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 POTEIP0CG38 1075 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 POTEJP0CG39 1038 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 MRE11P49959 708 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 ORC2Q13416 577 aaPredicted RBP23.32■■□□□ 1.32
TRIM4-202ENST00000354241 RBSNQ9H1K0 784 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 CCPG1Q9ULG6 757 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 MRPL11Q9Y3B7 192 aaKnown RBP23.32■■□□□ 1.32
TRIM4-202ENST00000354241 CTDP1Q9Y5B0 961 aaPredicted RBP23.32■■□□□ 1.32
TRIM4-202ENST00000354241 ABCB11O95342 1321 aa23.32■■□□□ 1.32
TRIM4-202ENST00000354241 TDP2O95551 362 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 ICAM1P05362 532 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 MCTP2Q6DN12 878 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 DTHD1Q6ZMT9 781 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 SYMPKQ92797 1274 aaKnown RBP23.31■■□□□ 1.32
TRIM4-202ENST00000354241 EPSTI1Q96J88 318 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 AGBL1Q96MI9 1066 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 TIGD1Q96MW7 591 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 FUCA2Q9BTY2 467 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 ELP3Q9H9T3 547 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 PTPRFP10586 1907 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 SPDYE3A6NKU9 549 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 ZNF536O15090 1300 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 OR52Z1P0C646 297 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 CCDC192P0DO97 292 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms