RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 IQCKQ8N0W5 287 aa16.64■□□□□ 0.25
TRAF3-202ENST00000351691 TMTC2Q8N394 836 aa16.64■□□□□ 0.25
TRAF3-202ENST00000351691 ZNF507Q8TCN5 953 aa16.64■□□□□ 0.25
TRAF3-202ENST00000351691 NGLY1Q96IV0 654 aa16.64■□□□□ 0.25
TRAF3-202ENST00000351691 LRRC1Q9BTT6 524 aa16.64■□□□□ 0.25
TRAF3-202ENST00000351691 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
TRAF3-202ENST00000351691 ZNF185O15231 689 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 MBD4O95243 580 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 FAM107AO95990 144 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 TCP1P17987 556 aaKnown RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 CCDC152Q4G0S7 254 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 ZNF658Q5TYW1 1059 aaPredicted RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 FMNL3Q8IVF7 1028 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 MAGEB6Q8N7X4 407 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 SPATA4Q8NEY3 305 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 N4BP2L2Q92802 583 aaPredicted RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 ZIM3Q96PE6 472 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 SLC40A1Q9NP59 571 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
TRAF3-202ENST00000351691 ZNHIT6Q9NWK9 470 aaKnown RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 DMGDHQ9UI17 866 aaKnown RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
TRAF3-202ENST00000351691 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 CDR1P51861 262 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 VAV2P52735 878 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 SNCBQ16143 134 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 NLRP14Q86W24 1093 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 NELFBQ8WX92 580 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 RABEP2Q9H5N1 569 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 BCORQ6W2J9 1755 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 SPATA31A5Q5VU36 1347 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 SPATA31A7Q8IWB4 1347 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 TACC1O75410 805 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 IFFO1Q0D2I5 559 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 SEMA3FQ13275 785 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 EP400NLQ6ZTU2 488 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 MYCBPAPQ8TBZ2 947 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 EPSTI1Q96J88 318 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 RNPC3Q96LT9 517 aaKnown RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 CCT8L2Q96SF2 557 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
TRAF3-202ENST00000351691 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-202ENST00000351691 GSG1L2A8MUP6 293 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 HMGB1P1B2RPK0 211 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 SCP2P22307 547 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 DNM2P50570 870 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 KIF5AQ12840 1032 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 TTC19Q6DKK2 380 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 INTS5Q6P9B9 1019 aaKnown RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 P3H4Q92791 437 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 MDH1P40925 334 aaKnown RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 HAUS3Q68CZ6 603 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
TRAF3-202ENST00000351691 FAXDC2Q96IV6 333 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 TTYH3Q9C0H2 523 aa16.61■□□□□ 0.25
TRAF3-202ENST00000351691 XDHP47989 1333 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
TRAF3-202ENST00000351691 NR1D1P20393 614 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 SLC8A1P32418 973 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 ZBED6P86452 979 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 NR5A1Q13285 461 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 RTN1Q16799 776 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 CFAP58Q5T655 872 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 RNF187Q5TA31 235 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-202ENST00000351691 PARP9Q8IXQ6 854 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 IFT20Q8IY31 132 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-202ENST00000351691 ARFGAP2Q8N6H7 521 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 HDAC7Q8WUI4 952 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 NHEJ1Q9H9Q4 299 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-202ENST00000351691 ATP6V0A4Q9HBG4 840 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 RNF14Q9UBS8 474 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 HYOU1Q9Y4L1 999 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
TRAF3-202ENST00000351691 EZRP15311 586 aaKnown RBP16.6■□□□□ 0.25
TRAF3-202ENST00000351691 IRF2BP1Q8IU81 584 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms