RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ADD3Q9UEY8 706 aaKnown RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 FLT4P35916 1363 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 CXCR5P32302 372 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 HERVK_113P62684 666 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 AACSQ86V21 672 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 TAX1BP1Q86VP1 789 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 CREG2Q8IUH2 290 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 OR2W6PQ8NHA6 318 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 MAIP1Q8WWC4 291 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 COL15A1P39059 1388 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 CEMIPQ8WUJ3 1361 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 MACROD2A1Z1Q3 448 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 F8W031 263 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 CNGA1P29973 690 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 KRT32Q14532 448 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 ZNF268Q14587 947 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 MEX3CQ5U5Q3 659 aaKnown RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 MMGT1Q8N4V1 131 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 PHC3Q8NDX5 983 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 SPATA4Q8NEY3 305 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 LACRTQ9GZZ8 138 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 PA2G4Q9UQ80 394 aaKnown RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 SOS2Q07890 1332 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 NPTXRO95502 500 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 ATP2A2P16615 1042 aaKnown RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 FECHP22830 423 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 CCND1P24385 295 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 KRT9P35527 623 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 RFC5P40937 340 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 INHBCP55103 352 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 PAK2Q13177 524 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 KIF2BQ8N4N8 673 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 MLKLQ8NB16 471 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 IP6K1Q92551 441 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 CNOT8Q9UFF9 292 aaKnown RBP11.78□□□□□ -0.52
CAPN3-203ENST00000349748 LNPEPQ9UIQ6 1025 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 GGT7Q9UJ14 662 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 KCNH3Q9ULD8 1083 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 SLC12A4Q9UP95 1085 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
CAPN3-203ENST00000349748 C5orf60A6NFR6 353 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 SMAPO00193 183 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 CAPN15O75808 1086 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 STAT6P42226 847 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 RASA3Q14644 834 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 SLC39A14Q15043 492 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 IQCEQ6IPM2 695 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 HAUS4Q9H6D7 363 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 STK38LQ9Y2H1 464 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 ZNF510Q9Y2H8 683 aa11.77□□□□□ -0.52
CAPN3-203ENST00000349748 MED23Q9ULK4 1368 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 MYH15Q9Y2K3 1946 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 ALADP13716 330 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.53
CAPN3-203ENST00000349748 PCK1P35558 622 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 VAV2P52735 878 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 TRADDQ15628 312 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 ODF2Q5BJF6 829 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 TMEM154Q6P9G4 183 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 TSHZ1Q6ZSZ6 1077 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 SDCCAG8Q86SQ7 713 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-203ENST00000349748 GPATCH3Q96I76 525 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 STRN4Q9NRL3 753 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 RHBDL2Q9NX52 303 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.53
CAPN3-203ENST00000349748 PLAAQ9Y263 795 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.53
CAPN3-203ENST00000349748 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-203ENST00000349748 GLI1P08151 1106 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 PARP1P09874 1014 aaKnown RBP11.76□□□□□ -0.53
CAPN3-203ENST00000349748 DRD4P21917 467 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 FUT4P22083 530 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 PDIA3P30101 505 aaKnown RBP11.76□□□□□ -0.53
CAPN3-203ENST00000349748 BEND3Q5T5X7 828 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 LONP2Q86WA8 852 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 SMCR8Q8TEV9 937 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-203ENST00000349748 ANKRD24Q8TF21 1146 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 CCDC51Q96ER9 411 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
CAPN3-203ENST00000349748 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-203ENST00000349748 ZMYND8Q9ULU4 1186 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-203ENST00000349748 PHF24Q9UPV7 400 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms