RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CCDC114Q96M63 670 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 JADE2Q9NQC1 790 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 DENND2AQ9ULE3 1009 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 PLCH1Q4KWH8 1693 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 DISP2A7MBM2 1401 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 HMGB1P1B2RPK0 211 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 PDE8AO60658 829 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 PCP11498 1178 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 SLC5A1P13866 664 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 AFMP43652 599 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 GUCY1A3Q02108 690 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 UBXN1Q04323 297 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 PAK1Q13153 545 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 RCSD1Q6JBY9 416 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 NLRP10Q86W26 655 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 SMYD4Q8IYR2 804 aaPredicted RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 MB21D1Q8N884 522 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 TRIM58Q8NG06 486 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 P3H4Q92791 437 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 LACRTQ9GZZ8 138 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 CENPHQ9H3R5 247 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 ANAPC4Q9UJX5 808 aa11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 TPX2Q9ULW0 747 aaKnown RBP11.48□□□□□ -0.57
CHRNA1-202ENST00000348749 RCCD1A6NED2 376 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 ZNF233A6NK53 670 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 LGALS16A8MUM7 142 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 PDHBP11177 359 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 IL2RBP14784 551 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 TCP1P17987 556 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 ATP2B2Q01814 1243 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 MAP2K1Q02750 393 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 XRCC4Q13426 336 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CHRNA2Q15822 529 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 LACTB2Q53H82 288 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CFAP58Q5T655 872 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CEP57Q86XR8 500 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 SPATA5Q8NB90 893 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CYFIP2Q96F07 1278 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 GREM2Q9H772 168 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 BATF3Q9NR55 127 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 MYH2Q9UKX2 1941 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 KLHL33A6NCF5 533 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 PRPF3O43395 683 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 MBD4O95243 580 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 KRT14P02533 472 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CALM1P0DP23 149 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CALM2P0DP24 149 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CALM3P0DP25 149 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 GUCY1A2P33402 732 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 KRT2P35908 639 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 PHKA1P46020 1223 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 VAV2P52735 878 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 ICA1Q05084 483 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 ITGB3BPQ13352 177 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 KCTD16Q68DU8 428 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 NAIF1Q69YI7 327 aaPredicted RBP11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 ZNF654Q8IZM8 581 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 ATP6V1G3Q96LB4 118 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 RMND1Q9NWS8 449 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 KCNJ14Q9UNX9 436 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 TFR2Q9UP52 801 aa11.47□□□□□ -0.57
CHRNA1-202ENST00000348749 DLEC1Q9Y238 1755 aa11.46□□□□□ -0.57
CHRNA1-202ENST00000348749 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-202ENST00000348749 TOGARAM1Q9Y4F4 1720 aa11.46□□□□□ -0.57
CHRNA1-202ENST00000348749 H7C1D1 291 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 MGRN1O60291 552 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 SEC24CP53992 1094 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 SARNPP82979 210 aaKnown RBP11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 CDK17Q00537 523 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 ANKRD20A8PQ5CZ79 823 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 ARFGAP2Q8N6H7 521 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 ZNF507Q8TCN5 953 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 HOOK2Q96ED9 719 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 GDF3Q9NR23 364 aa11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.58
CHRNA1-202ENST00000348749 C5orf60A6NFR6 353 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 ERVV-1B6SEH8 477 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 E7EVH7 732 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 TACC1O75410 805 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 DNAJC8O75937 253 aaPredicted RBP11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 GHRP10912 638 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 CASP1P29466 404 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 SLC7A5Q01650 507 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 KIF5AQ12840 1032 aa11.45□□□□□ -0.58
CHRNA1-202ENST00000348749 PAK2Q13177 524 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms