RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 A0A0D9SFI3 127 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 CUTAO60888 179 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 MMP14P50281 582 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 ASIC2Q16515 512 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 Q4G0T1 1027 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 ATL3Q6DD88 541 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 KRT25Q7Z3Z0 450 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 SMCR8Q8TEV9 937 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 KIFAP3Q92845 792 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 TXNDC16Q9P2K2 825 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 PTH1RQ03431 593 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 PAK2Q13177 524 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 PSD3Q9NYI0 1048 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 MAN1A2O60476 641 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 KCNA4P22459 653 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 MYO1EQ12965 1108 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 CUL4BQ13620 913 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 GPR162Q16538 588 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 BRDTQ58F21 947 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 HIBCHQ6NVY1 386 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 EPSTI1Q96J88 318 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 USP44Q9H0E7 712 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 HOMER3Q9NSC5 361 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 ATP5JP18859 108 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 CLSTN2Q9H4D0 955 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 H7C1D1 291 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 TMCC1O94876 653 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 FLCNQ8NFG4 579 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 EIF2AQ9BY44 585 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 KDRP35968 1356 aa12.13□□□□□ -0.47
SMARCE1-202ENST00000348513 CHGBP05060 677 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 PDHA1P08559 390 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ATICP31939 592 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 SLC8A3P57103 927 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 FANCCQ00597 558 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 CHRNDQ07001 517 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 DRP2Q13474 957 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 C16orf87Q6PH81 154 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 GREM2Q9H772 168 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 RGL1Q9NZL6 768 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 YY1P25490 414 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 LRMPQ12912 555 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 PNOCQ13519 176 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ME3Q16798 604 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 PPP1R13BQ96KQ4 1090 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 EXOC7Q9UPT5 735 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ZFYVE16Q7Z3T8 1539 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 EXOC3O60645 756 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 E2F6O75461 281 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 KIAA2013Q8IYS2 634 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ZNF654Q8IZM8 581 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 PSMB7Q99436 277 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 POSTNQ15063 836 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ZNF483Q8TF39 744 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 KLHL14Q9P2G3 628 aa12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCE1-202ENST00000348513 CCDC151A5D8V7 595 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 ALAS1P13196 640 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 BTDP43251 543 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 TRIM74Q86UV6 250 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 TRIM73Q86UV7 250 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 PUS3Q9BZE2 481 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 PARVBQ9HBI1 364 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 TRIM37O94972 964 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 CRKLP46109 303 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
SMARCE1-202ENST00000348513 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms