RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 REXO1Q8N1G1 1221 aaKnown RBP16.32■□□□□ 0.2
NUP50-201ENST00000347635 DPF2Q92785 391 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 NDUFA10O95299 355 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 RTKN2Q8IZC4 609 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 PNMA1Q8ND90 353 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 ISCA1Q9BUE6 129 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 NLRC4Q9NPP4 1024 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 MTRF1LQ9UGC7 380 aaKnown RBP16.32■□□□□ 0.2
NUP50-201ENST00000347635 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 SMIM23A6NLE4 172 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 TCP11X2Q5H9J9 407 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 GBP6Q6ZN66 633 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 RUFY4Q6ZNE9 571 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 ENGASEQ8NFI3 743 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 UTP11Q9Y3A2 253 aaKnown RBP16.31■□□□□ 0.2
NUP50-201ENST00000347635 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 CEP104O60308 925 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 HSPA1LP34931 641 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 TECP42680 631 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 NCAPH2Q6IBW4 605 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 TLDC2A0PJX2 215 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 DHTKD1Q96HY7 919 aaPredicted RBP16.31■□□□□ 0.2
NUP50-201ENST00000347635 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
NUP50-201ENST00000347635 TADA3O75528 432 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 HS2ST1Q7LGA3 356 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
NUP50-201ENST00000347635 SAMD15Q9P1V8 674 aa16.31■□□□□ 0.2
NUP50-201ENST00000347635 CALUO43852 315 aaPredicted RBP16.3■□□□□ 0.2
NUP50-201ENST00000347635 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
NUP50-201ENST00000347635 USP37Q86T82 979 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 CUEDC2Q9H467 287 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 AS3MTQ9HBK9 375 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 PCDHA4Q9UN74 947 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 GYS2P54840 703 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
NUP50-201ENST00000347635 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
NUP50-201ENST00000347635 LAD1O00515 517 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 HAUS3Q68CZ6 603 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 LSM14BQ9BX40 385 aaKnown RBP16.3■□□□□ 0.2
NUP50-201ENST00000347635 SEC31BQ9NQW1 1179 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 BUB1O43683 1085 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 SLC1A4P43007 532 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 RASGRF1Q13972 1273 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 THAP9Q9H5L6 903 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
NUP50-201ENST00000347635 ANKRD26Q9UPS8 1709 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 GNA14O95837 355 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 HERC4Q5GLZ8 1057 aaPredicted RBP16.29■□□□□ 0.2
NUP50-201ENST00000347635 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 GUCY2FP51841 1108 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 FOXN1O15353 648 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 BTDP43251 543 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 ZMYND10O75800 440 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 MYL1P05976 194 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 FDPSP14324 419 aaKnown RBP16.29■□□□□ 0.2
NUP50-201ENST00000347635 MTMR3Q13615 1198 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 P2RX5Q93086 422 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 COA1Q9GZY4 146 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
NUP50-201ENST00000347635 E7EVH7 732 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 HLFQ16534 295 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 WDR24Q96S15 920 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 MMP10P09238 476 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 TUBE1Q9UJT0 475 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 ZBED4O75132 1171 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 PLS1Q14651 629 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 DDX12PQ92771 950 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 FLOT1O75955 427 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 C2orf54Q08AI8 447 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 CHURC1Q8WUH1 139 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 HINFPQ9BQA5 517 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 NHEJ1Q9H9Q4 299 aaPredicted RBP16.28■□□□□ 0.2
NUP50-201ENST00000347635 IFT172Q9UG01 1749 aa16.28■□□□□ 0.2
NUP50-201ENST00000347635 A0A1W2PRG0 241 aa16.27■□□□□ 0.2
NUP50-201ENST00000347635 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.2
NUP50-201ENST00000347635 CCDC170Q8IYT3 715 aa16.27■□□□□ 0.2
NUP50-201ENST00000347635 SYCE1Q8N0S2 351 aa16.27■□□□□ 0.2
NUP50-201ENST00000347635 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
NUP50-201ENST00000347635 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms