RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 KRT31Q15323 416 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 WWC2Q6AWC2 1192 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 RMND1Q9NWS8 449 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 ZSWIM5Q9P217 1185 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 B4E1Z4 1266 aa17.75■□□□□ 0.43
HMGA1-202ENST00000347617 H0YIN7 160 aa17.75■□□□□ 0.43
HMGA1-202ENST00000347617 C6orf229H3BNL8 230 aa17.75■□□□□ 0.43
HMGA1-202ENST00000347617 DYNLL1P63167 89 aaKnown RBP17.75■□□□□ 0.43
HMGA1-202ENST00000347617 RTN1Q16799 776 aa17.75■□□□□ 0.43
HMGA1-202ENST00000347617 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
HMGA1-202ENST00000347617 GOLGA6CA6NDK9 693 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
HMGA1-202ENST00000347617 KRT86O43790 486 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 GOLGA6DP0CG33 693 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 CD44P16070 742 aaKnown RBP17.74■□□□□ 0.43
HMGA1-202ENST00000347617 KRT9P35527 623 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 CCNI2Q6ZMN8 369 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-202ENST00000347617 MICALL1Q8N3F8 863 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 OR8K1Q8NGG5 319 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 SLC16A10Q8TF71 515 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 GOLGA6AQ9NYA3 693 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 ARPP21Q9UBL0 812 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-202ENST00000347617 FAM184BQ9ULE4 1060 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 GRIN1Q05586 938 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 NCAPH2Q6IBW4 605 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 GRAMD1CQ8IYS0 662 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 ESR2Q92731 530 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 CNKSR1Q969H4 720 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 EYA3Q99504 573 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 SLF1Q9BQI6 1058 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 ZC3H12CQ9C0D7 883 aaKnown RBP17.74■□□□□ 0.43
HMGA1-202ENST00000347617 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
HMGA1-202ENST00000347617 PCDHB6Q9Y5E3 794 aa17.74■□□□□ 0.43
HMGA1-202ENST00000347617 A0A0U1RQJ8 604 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 EPB41P11171 864 aaKnown RBP17.73■□□□□ 0.43
HMGA1-202ENST00000347617 CYLC1P35663 651 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-202ENST00000347617 GRIPAP1Q4V328 841 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 CC2D2BQ6DHV5 1058 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 KLHL10Q6JEL2 608 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 B4GALNT4Q76KP1 1039 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 CCDC125Q86Z20 511 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-202ENST00000347617 ATRIPQ8WXE1 791 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 IQCDQ96DY2 449 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 DNAJC7Q99615 494 aa17.73■□□□□ 0.43
HMGA1-202ENST00000347617 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 H7C1D1 291 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 ORC4O43929 436 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 PLCG2P16885 1265 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 IRAK1P51617 712 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 STX17P56962 302 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 SETQ01105 290 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-202ENST00000347617 PAK1Q13153 545 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 TCP11X2Q5H9J9 407 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-202ENST00000347617 ZNF572Q7Z3I7 529 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-202ENST00000347617 MMGT1Q8N4V1 131 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 DRC1Q96MC2 740 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 CAPS2Q9BXY5 557 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-202ENST00000347617 TSGA10Q9BZW7 698 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 TACC3Q9Y6A5 838 aa17.72■□□□□ 0.43
HMGA1-202ENST00000347617 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 ERICH2A1L162 156 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 GTPBP6O43824 516 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 RXRAP19793 462 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 GSCP56915 257 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 SKOR1P84550 965 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 ALS2CLQ60I27 953 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 CCDC170Q8IYT3 715 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 NUP58Q9BVL2 599 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 GUCA1BQ9UMX6 200 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 CTNND2Q9UQB3 1225 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 LUC7L2Q9Y383 392 aaKnown RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 FAM169AQ9Y6X4 670 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 MINDY4BA8MYZ0 360 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 KCNJ18B7U540 433 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 EIF3HO15372 352 aaKnown RBP eCLIP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 IPO7O95373 1038 aaKnown RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 COL11A2P13942 1736 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 EEF1GP26641 437 aaKnown RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 GGCXP38435 758 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 APBA1Q02410 837 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 KCNJ12Q14500 433 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
HMGA1-202ENST00000347617 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 NOC3LQ8WTT2 800 aaKnown RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 A1CFQ9NQ94 594 aaKnown RBP17.71■□□□□ 0.43
HMGA1-202ENST00000347617 USP17L12C9JPN9 530 aa17.7■□□□□ 0.42
HMGA1-202ENST00000347617 USP17L21D6R901 530 aa17.7■□□□□ 0.42
HMGA1-202ENST00000347617 WTAPQ15007 396 aa17.7■□□□□ 0.42
HMGA1-202ENST00000347617 CCDC122Q5T0U0 273 aa17.7■□□□□ 0.42
HMGA1-202ENST00000347617 ZNF658Q5TYW1 1059 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms