RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 TMED1Q13445 227 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 TRIM50Q86XT4 487 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 ABCC12Q96J65 1359 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 ARHGDIAP52565 204 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 GABPAQ06546 454 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 TCP11Q8WWU5 503 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.48□□□□□ -0.09
COL6A3-202ENST00000347401 AP2B1P63010 937 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 MYH15Q9Y2K3 1946 aa14.48□□□□□ -0.09
COL6A3-202ENST00000347401 EDC4Q6P2E9 1401 aaKnown RBP14.47□□□□□ -0.09
COL6A3-202ENST00000347401 GUCY2DQ02846 1103 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 NME9Q86XW9 330 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 ENAHQ8N8S7 591 aaPredicted RBP14.47□□□□□ -0.09
COL6A3-202ENST00000347401 RNF34Q969K3 372 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 TEKT2Q9UIF3 430 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 EMILIN1Q9Y6C2 1016 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 PPP6R2O75170 966 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 TERF2Q15554 542 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 MROH5Q6ZUA9 1318 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 SYNGAP1Q96PV0 1343 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 PYGLP06737 847 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 NXNQ6DKJ4 435 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 DIS3L2Q8IYB7 885 aaKnown RBP14.47□□□□□ -0.09
COL6A3-202ENST00000347401 TTLL12Q14166 644 aaPredicted RBP14.47□□□□□ -0.09
COL6A3-202ENST00000347401 ZNF174Q15697 407 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 FSCBQ5H9T9 825 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 KLC3Q6P597 504 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 TEX11Q8IYF3 940 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 TMEM63CQ9P1W3 806 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 ZMYM6O95789 1325 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 SPAG7O75391 227 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 MYSM1Q5VVJ2 828 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 LRRC37BQ96QE4 947 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 ITGB1BP2Q9UKP3 347 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 RFC4P35249 363 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 BZW1Q7L1Q6 419 aaKnown RBP14.47□□□□□ -0.09
COL6A3-202ENST00000347401 EXOC8Q8IYI6 725 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 XAGE3Q8WTP9 111 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
COL6A3-202ENST00000347401 NUB1Q9Y5A7 615 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
COL6A3-202ENST00000347401 NR1I2O75469 434 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 CDC37Q16543 378 aaPredicted RBP14.46□□□□□ -0.09
COL6A3-202ENST00000347401 PCGF5Q86SE9 256 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 SNX14Q9Y5W7 946 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 H2AFZP0C0S5 128 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 ATF7P17544 494 aaPredicted RBP14.46□□□□□ -0.09
COL6A3-202ENST00000347401 H2AFVQ71UI9 128 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 CEP19Q96LK0 163 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 SNX29Q8TEQ0 813 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 GIPC2Q8TF65 315 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 CD109Q6YHK3 1445 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 ATP10DQ9P241 1426 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
COL6A3-202ENST00000347401 PRPF38AQ8NAV1 312 aaKnown RBP14.46□□□□□ -0.09
COL6A3-202ENST00000347401 PLCH2O75038 1416 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 ZNF710Q8N1W2 664 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 NEK9Q8TD19 979 aa14.46□□□□□ -0.09
COL6A3-202ENST00000347401 GPATCH8Q9UKJ3 1502 aaKnown RBP14.46□□□□□ -0.09
COL6A3-202ENST00000347401 IQANK1A0A1B0GTG1 560 aa14.46□□□□□ -0.1
COL6A3-202ENST00000347401 S100BP04271 92 aaPredicted RBP14.46□□□□□ -0.1
COL6A3-202ENST00000347401 LMBR1LQ6UX01 489 aa14.46□□□□□ -0.1
COL6A3-202ENST00000347401 GPC4O75487 556 aa14.46□□□□□ -0.1
COL6A3-202ENST00000347401 VPS41P49754 854 aa14.46□□□□□ -0.1
COL6A3-202ENST00000347401 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.46□□□□□ -0.1
COL6A3-202ENST00000347401 ZBTB3Q9H5J0 574 aa14.46□□□□□ -0.1
COL6A3-202ENST00000347401 KIF9Q9HAQ2 790 aa14.46□□□□□ -0.1
COL6A3-202ENST00000347401 KRT8P05787 483 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 PARP10Q53GL7 1025 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 ANKRD42Q8N9B4 389 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 TRAIPQ9BWF2 469 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 RASSF10A6NK89 507 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 HNRNPRO43390 633 aaKnown RBP14.45□□□□□ -0.1
COL6A3-202ENST00000347401 ART3Q13508 389 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 CYB5RLQ6IPT4 315 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 MRPL47Q9HD33 250 aaKnown RBP14.45□□□□□ -0.1
COL6A3-202ENST00000347401 SBNO2Q9Y2G9 1366 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 RNF207Q6ZRF8 634 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 MYCT1Q8N699 235 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 APOA1P02647 267 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 FOXP1Q9H334 677 aaPredicted RBP14.45□□□□□ -0.1
COL6A3-202ENST00000347401 TAB2Q9NYJ8 693 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 COL4A3BPQ9Y5P4 624 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 ESRRBO95718 433 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 ATICP31939 592 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 DPH6Q7L8W6 267 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 LSM14BQ9BX40 385 aaKnown RBP14.45□□□□□ -0.1
COL6A3-202ENST00000347401 PALMDQ9NP74 551 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 SPTLC3Q9NUV7 552 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 CADPS2Q86UW7 1296 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 ADKP55263 362 aaKnown RBP14.45□□□□□ -0.1
COL6A3-202ENST00000347401 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 TCEANC2Q96MN5 208 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 MTRQ99707 1265 aa14.45□□□□□ -0.1
COL6A3-202ENST00000347401 FAM207AQ9NSI2 230 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms