RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
APP-201ENST00000346798 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
APP-201ENST00000346798 SLC35G1Q2M3R5 365 aa13.25□□□□□ -0.29
APP-201ENST00000346798 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
APP-201ENST00000346798 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
APP-201ENST00000346798 SH3RF3Q8TEJ3 882 aaPredicted RBP13.25□□□□□ -0.29
APP-201ENST00000346798 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
APP-201ENST00000346798 MYO1AQ9UBC5 1043 aa13.25□□□□□ -0.29
APP-201ENST00000346798 SRP68Q9UHB9 627 aaKnown RBP13.25□□□□□ -0.29
APP-201ENST00000346798 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
APP-201ENST00000346798 MYO1CO00159 1063 aa13.24□□□□□ -0.29
APP-201ENST00000346798 PDE2AO00408 941 aaPredicted RBP13.24□□□□□ -0.29
APP-201ENST00000346798 KLRC4O43908 158 aa13.24□□□□□ -0.29
APP-201ENST00000346798 MYBL2P10244 700 aa13.24□□□□□ -0.29
APP-201ENST00000346798 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
APP-201ENST00000346798 TXKP42681 527 aa13.24□□□□□ -0.29
APP-201ENST00000346798 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
APP-201ENST00000346798 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
APP-201ENST00000346798 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.24□□□□□ -0.29
APP-201ENST00000346798 CCDC42Q96M95 316 aa13.24□□□□□ -0.29
APP-201ENST00000346798 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
APP-201ENST00000346798 MMRN2Q9H8L6 949 aa13.24□□□□□ -0.29
APP-201ENST00000346798 CAPN11Q9UMQ6 739 aa13.24□□□□□ -0.29
APP-201ENST00000346798 FECHP22830 423 aa13.24□□□□□ -0.29
APP-201ENST00000346798 DNM2P50570 870 aa13.24□□□□□ -0.29
APP-201ENST00000346798 USP14P54578 494 aa13.24□□□□□ -0.29
APP-201ENST00000346798 KRT83P78385 493 aa13.24□□□□□ -0.29
APP-201ENST00000346798 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
APP-201ENST00000346798 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
APP-201ENST00000346798 DUSP9Q99956 384 aaKnown RBP13.24□□□□□ -0.29
APP-201ENST00000346798 ACBD3Q9H3P7 528 aa13.24□□□□□ -0.29
APP-201ENST00000346798 MLXIPQ9HAP2 919 aa13.24□□□□□ -0.29
APP-201ENST00000346798 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
APP-201ENST00000346798 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
APP-201ENST00000346798 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
APP-201ENST00000346798 ARPP21Q9UBL0 812 aaPredicted RBP13.24□□□□□ -0.29
APP-201ENST00000346798 ZPR1O75312 459 aa13.23□□□□□ -0.29
APP-201ENST00000346798 EEF1GP26641 437 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 SLC7A5Q01650 507 aa13.23□□□□□ -0.29
APP-201ENST00000346798 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 TTI2Q6NXR4 508 aa13.23□□□□□ -0.29
APP-201ENST00000346798 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
APP-201ENST00000346798 ZNF507Q8TCN5 953 aa13.23□□□□□ -0.29
APP-201ENST00000346798 DNAJC7Q99615 494 aa13.23□□□□□ -0.29
APP-201ENST00000346798 BIN2Q9UBW5 565 aaPredicted RBP13.23□□□□□ -0.29
APP-201ENST00000346798 GOLGB1Q14789 3259 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 MYH10P35580 1976 aa13.23□□□□□ -0.29
APP-201ENST00000346798 TULP2O00295 520 aa13.23□□□□□ -0.29
APP-201ENST00000346798 KIF5AQ12840 1032 aa13.23□□□□□ -0.29
APP-201ENST00000346798 SPA17Q15506 151 aa13.23□□□□□ -0.29
APP-201ENST00000346798 DNAJC21Q5F1R6 531 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 NBPF5PQ86XG9 351 aaPredicted RBP13.23□□□□□ -0.29
APP-201ENST00000346798 P2RX5Q93086 422 aa13.23□□□□□ -0.29
APP-201ENST00000346798 CRACR2AQ9BSW2 395 aa13.23□□□□□ -0.29
APP-201ENST00000346798 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
APP-201ENST00000346798 RRP15Q9Y3B9 282 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 KLRF2D3W0D1 207 aa13.23□□□□□ -0.29
APP-201ENST00000346798 FGRP09769 529 aa13.23□□□□□ -0.29
APP-201ENST00000346798 PPARDQ03181 441 aa13.23□□□□□ -0.29
APP-201ENST00000346798 GRIK5Q16478 980 aa13.23□□□□□ -0.29
APP-201ENST00000346798 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
APP-201ENST00000346798 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
APP-201ENST00000346798 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
APP-201ENST00000346798 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
APP-201ENST00000346798 PSMD14O00487 310 aa13.22□□□□□ -0.29
APP-201ENST00000346798 GIMAP8Q8ND71 665 aaPredicted RBP13.22□□□□□ -0.29
APP-201ENST00000346798 FAM71BQ8TC56 605 aa13.22□□□□□ -0.29
APP-201ENST00000346798 THAP9Q9H5L6 903 aa13.22□□□□□ -0.29
APP-201ENST00000346798 MOCS3O95396 460 aa13.22□□□□□ -0.29
APP-201ENST00000346798 LRRC41Q15345 812 aa13.22□□□□□ -0.29
APP-201ENST00000346798 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
APP-201ENST00000346798 TTC19Q6DKK2 380 aaPredicted RBP13.22□□□□□ -0.29
APP-201ENST00000346798 NLRP3Q96P20 1036 aa13.22□□□□□ -0.29
APP-201ENST00000346798 MYH14Q7Z406 1995 aaKnown RBP13.22□□□□□ -0.29
APP-201ENST00000346798 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
APP-201ENST00000346798 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
APP-201ENST00000346798 EPHB6O15197 1021 aa13.22□□□□□ -0.29
APP-201ENST00000346798 AKR1B10O60218 316 aa13.22□□□□□ -0.29
APP-201ENST00000346798 SRGNP10124 158 aa13.22□□□□□ -0.29
APP-201ENST00000346798 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
APP-201ENST00000346798 GGCXP38435 758 aa13.22□□□□□ -0.29
APP-201ENST00000346798 CCDC155Q8N6L0 562 aa13.22□□□□□ -0.29
APP-201ENST00000346798 HDAC7Q8WUI4 952 aa13.22□□□□□ -0.29
APP-201ENST00000346798 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
APP-201ENST00000346798 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
APP-201ENST00000346798 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
APP-201ENST00000346798 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
APP-201ENST00000346798 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
APP-201ENST00000346798 CACNA1SQ13698 1873 aa13.22□□□□□ -0.29
APP-201ENST00000346798 LRP5O75197 1615 aa13.21□□□□□ -0.29
APP-201ENST00000346798 RHOBTB3O94955 611 aa13.21□□□□□ -0.29
APP-201ENST00000346798 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
APP-201ENST00000346798 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
APP-201ENST00000346798 GJA10Q969M2 543 aa13.21□□□□□ -0.29
APP-201ENST00000346798 POLD4Q9HCU8 107 aa13.21□□□□□ -0.29
APP-201ENST00000346798 CAPN6Q9Y6Q1 641 aa13.21□□□□□ -0.29
APP-201ENST00000346798 STXBP3O00186 592 aa13.21□□□□□ -0.29
APP-201ENST00000346798 NCK2O43639 380 aa13.21□□□□□ -0.29
APP-201ENST00000346798 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms