RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 CREG2Q8IUH2 290 aa23.85■■□□□ 1.41
TRIM3-201ENST00000345851 CENPHQ9H3R5 247 aa23.85■■□□□ 1.41
TRIM3-201ENST00000345851 ZPR1O75312 459 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 SLC5A1P13866 664 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 CYLC1P35663 651 aaPredicted RBP23.84■■□□□ 1.41
TRIM3-201ENST00000345851 KLK7P49862 253 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 KRT26Q7Z3Y9 468 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
TRIM3-201ENST00000345851 NHEJ1Q9H9Q4 299 aaPredicted RBP23.84■■□□□ 1.41
TRIM3-201ENST00000345851 BTAF1O14981 1849 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 TRIM21P19474 475 aaKnown RBP23.84■■□□□ 1.41
TRIM3-201ENST00000345851 MFSD6Q6ZSS7 791 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 IFNL3Q8IZI9 196 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 CAPN11Q9UMQ6 739 aa23.84■■□□□ 1.41
TRIM3-201ENST00000345851 APBA1Q02410 837 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 ZIM3Q96PE6 472 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 COL5A3P25940 1745 aaPredicted RBP23.83■■□□□ 1.41
TRIM3-201ENST00000345851 MYH10P35580 1976 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 GYG1P46976 350 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 PMS1P54277 932 aaKnown RBP23.83■■□□□ 1.41
TRIM3-201ENST00000345851 ATP2B2Q01814 1243 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 PTGDRQ13258 359 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 NNTQ13423 1086 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 CLEC4GQ6UXB4 293 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 SPATA5Q8NB90 893 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 FANCBQ8NB91 859 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 LRWD1Q9UFC0 647 aa23.83■■□□□ 1.41
TRIM3-201ENST00000345851 RTCBQ9Y3I0 505 aaKnown RBP23.83■■□□□ 1.41
TRIM3-201ENST00000345851 LGALS16A8MUM7 142 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 B4DLN1 442 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 CCDC96Q2M329 555 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 AKNAD1Q5T1N1 836 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 NBPF5PQ86XG9 351 aaPredicted RBP23.82■■□□□ 1.4
TRIM3-201ENST00000345851 SPATA4Q8NEY3 305 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 GIMAP7Q8NHV1 300 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 PCMTD1Q96MG8 357 aaPredicted RBP23.82■■□□□ 1.4
TRIM3-201ENST00000345851 SETDB2Q96T68 719 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 CAPN6Q9Y6Q1 641 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 ANO9A1A5B4 782 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 ERICH2A1L162 156 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 RPS6KA4O75676 772 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 MBD4O95243 580 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 SKOR1P84550 965 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 KIF5AQ12840 1032 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 FERMT2Q96AC1 680 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 RNPC3Q96LT9 517 aaKnown RBP23.82■■□□□ 1.4
TRIM3-201ENST00000345851 ARMT1Q9H993 441 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 SNX12Q9UMY4 172 aa23.82■■□□□ 1.4
TRIM3-201ENST00000345851 RDXP35241 583 aaKnown RBP23.81■■□□□ 1.4
TRIM3-201ENST00000345851 KRT2P35908 639 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 EPHB4P54760 987 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 ZNF658Q5TYW1 1059 aaPredicted RBP23.81■■□□□ 1.4
TRIM3-201ENST00000345851 NFRKBQ6P4R8 1299 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 FAM196AQ6ZSG2 479 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 ZNF654Q8IZM8 581 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 MMGT1Q8N4V1 131 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 MLXIPQ9HAP2 919 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 ZNHIT6Q9NWK9 470 aaKnown RBP23.81■■□□□ 1.4
TRIM3-201ENST00000345851 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 PRKAB2O43741 272 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 FSBPO95073 299 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 SEC24CP53992 1094 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 UBE3CQ15386 1083 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 MAGEB6Q8N7X4 407 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 QTRT2Q9H974 415 aaKnown RBP23.81■■□□□ 1.4
TRIM3-201ENST00000345851 RPN1P04843 607 aaKnown RBP23.81■■□□□ 1.4
TRIM3-201ENST00000345851 NAA35Q5VZE5 725 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 ZKSCAN4Q969J2 545 aaPredicted RBP23.81■■□□□ 1.4
TRIM3-201ENST00000345851 NARFQ9UHQ1 456 aa23.81■■□□□ 1.4
TRIM3-201ENST00000345851 MYH13Q9UKX3 1938 aa23.8■■□□□ 1.4
TRIM3-201ENST00000345851 ARID4AP29374 1257 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-201ENST00000345851 LSP1P33241 339 aa23.8■■□□□ 1.4
TRIM3-201ENST00000345851 GTPBP6O43824 516 aaPredicted RBP23.8■■□□□ 1.4
TRIM3-201ENST00000345851 CCDC181Q5TID7 509 aa23.8■■□□□ 1.4
TRIM3-201ENST00000345851 PDXDC2PQ6P474 469 aa23.8■■□□□ 1.4
TRIM3-201ENST00000345851 MOCS3O95396 460 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 PLEKP08567 350 aaPredicted RBP23.79■■□□□ 1.4
TRIM3-201ENST00000345851 TTC38Q5R3I4 469 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 TRIM47Q96LD4 638 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 STIM2Q9P246 746 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 H7C1D1 291 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 KLRK1P26718 216 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 NAP1L1P55209 391 aaKnown RBP23.79■■□□□ 1.4
TRIM3-201ENST00000345851 ACTN3Q08043 901 aaPredicted RBP23.79■■□□□ 1.4
TRIM3-201ENST00000345851 ZNF507Q8TCN5 953 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 CCDC43Q96MW1 224 aaKnown RBP23.79■■□□□ 1.4
TRIM3-201ENST00000345851 KRT23Q9C075 422 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 BAZ2BQ9UIF8 2168 aaKnown RBP23.79■■□□□ 1.4
TRIM3-201ENST00000345851 RREB1Q92766 1687 aa23.79■■□□□ 1.4
TRIM3-201ENST00000345851 SCP2P22307 547 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 IFT88Q13099 833 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 HAUS3Q68CZ6 603 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 CNNM2Q9H8M5 875 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 ABCF2Q9UG63 623 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 ESYT3A0FGR9 886 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 PATL2C9JE40 543 aaKnown RBP23.78■■□□□ 1.4
TRIM3-201ENST00000345851 ZNF263O14978 683 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 EPB41P11171 864 aaKnown RBP23.78■■□□□ 1.4
TRIM3-201ENST00000345851 MEA1Q16626 185 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms