RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 CLNS1AP54105 237 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 PRPSAP1Q14558 356 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 SDCCAG3Q96C92 435 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 PANK4Q9NVE7 773 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 OCM2P0CE71 109 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 OCMP0CE72 109 aaPredicted RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 ADCY8P40145 1251 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 DBN1Q16643 649 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 SUPT20HL1Q3ZLR7 823 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 NAA35Q5VZE5 725 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 GCNAQ96QF7 691 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 HAUS8Q9BT25 410 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 A6NJR5 290 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 SRGAP2CP0DJJ0 459 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 CACNB3P54284 484 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 KLHL40Q2TBA0 621 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 LRGUKQ96M69 825 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 CPSF3Q9UKF6 684 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 SUGT1Q9Y2Z0 365 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 TTC41PQ6P2S7 1318 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 SERPINB6P35237 376 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 CHRNDQ07001 517 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 AOC3Q16853 763 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 CCNYQ8ND76 341 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 IPO11Q9UI26 975 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 PCDHB4Q9Y5E5 795 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 MROH5Q6ZUA9 1318 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 M0R2C6 588 aa13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
TRIOBP-202ENST00000344404 MTX1Q13505 466 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 DYNLT1P63172 113 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 METTL23Q86XA0 190 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 NDUFAB1O14561 156 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 GSTA4O15217 222 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 MMTAG2Q9BU76 263 aaKnown RBP13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 CAVIN2O95810 425 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF18P17022 549 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 CHMLP26374 656 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 CCNA1P78396 465 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 IFT20Q8IY31 132 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 FAM71BQ8TC56 605 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 MMP10P09238 476 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 RFX6Q8HWS3 928 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 PCDHA12Q9UN75 941 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
TRIOBP-202ENST00000344404 UPP2O95045 317 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 YWHAEP62258 255 aaKnown RBP13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 EXT2Q93063 718 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 VCX3AQ9NNX9 186 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 C1orf112Q9NSG2 853 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 ADKP55263 362 aaKnown RBP13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 FAM180AQ6UWF9 173 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 ARHGAP24Q8N264 748 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 APPBP2Q92624 585 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF335Q9H4Z2 1342 aaPredicted RBP13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 APOEP02649 317 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 RPS6KA1Q15418 735 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 NLRP4Q96MN2 994 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 SGK1O00141 431 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 KCNK3O14649 394 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 MAGEA1P43355 309 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 PDE6CP51160 858 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 POSTNQ15063 836 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 TMEM87BQ96K49 555 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 DPH5Q9H2P9 285 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
TRIOBP-202ENST00000344404 SCARA5Q6ZMJ2 495 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 TBC1D22AQ8WUA7 517 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 THAP12O43422 761 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 JAK2O60674 1132 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms