RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 DIS3Q9Y2L1 958 aaKnown RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 CLTCQ00610 1675 aaKnown RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 B4DLN1 442 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 GUCY2CP25092 1073 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 NT5C2P49902 561 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 NBPF10Q6P3W6 841 aaKnown RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 TRIM31Q9BZY9 425 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 RIC8AQ9NPQ8 531 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 PTPRMP28827 1452 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 LIFRP42702 1097 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 CTSWP56202 376 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 AEBP2Q6ZN18 517 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 EXOC5O00471 708 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 ZMYND10O75800 440 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 SLC7A5Q01650 507 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 TRIM68Q6AZZ1 485 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 CTNND1O60716 968 aaKnown RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 SERPING1P05155 500 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 ZNF804AQ7Z570 1209 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 MB21D1Q8N884 522 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 BICD1Q96G01 975 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 KRT12Q99456 494 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 NLRC4Q9NPP4 1024 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 BATF3Q9NR55 127 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 TMEM232C9JQI7 657 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 TNFAIP3P21580 790 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 GOLGA8FQ08AF8 430 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 GOLGA8DPQ0D2H9 430 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 PCDHA13Q9Y5I0 950 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 USPL1Q5W0Q7 1092 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 VPS52Q8N1B4 723 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 SNX29Q8TEQ0 813 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 P2RX5Q93086 422 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 PANK4Q9NVE7 773 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 ASIC3Q9UHC3 531 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 PGRMC1O00264 195 aaKnown RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 FERP16591 822 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 POLR2FP61218 127 aaKnown RBP5.26□□□□□ -1.57
CSMD3-203ENST00000343508 ADCY2Q08462 1091 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 MAN2A1Q16706 1144 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 PARP10Q53GL7 1025 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 ANKRD20A3Q5VUR7 823 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
CSMD3-203ENST00000343508 NBPF6Q5VWK0 638 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 SMYD4Q8IYR2 804 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 TCP11Q8WWU5 503 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 NBPF4Q96M43 638 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 TAF1DQ9H5J8 278 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 GMNCA6NCL1 334 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 CCDC188H7C350 402 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 ZBTB22O15209 634 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 ADD2P35612 726 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 C6orf118Q5T5N4 469 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 WDR93Q6P2C0 686 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 DYMQ7RTS9 669 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 RPGRQ92834 1020 aaKnown RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 ANKRD2Q9GZV1 360 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 GRID2IPA4D2P6 1211 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 SH2B2O14492 632 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 TBC1D8O95759 1140 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PHBP35232 272 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 ZNF131P52739 623 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 RCAN1P53805 252 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 DNAJC5BQ9UF47 199 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 DNM3Q9UQ16 869 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 GCNT3O95395 438 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 KRT15P19012 456 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 ARID4AP29374 1257 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 MAN1A1P33908 653 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 NLRP3Q96P20 1036 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 AGTPBP1Q9UPW5 1226 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 EIF3HO15372 352 aaKnown RBP eCLIP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PLCB3Q01970 1234 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PTPN12Q05209 780 aaKnown RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 NR1I3Q14994 352 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 WDR78Q5VTH9 848 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 KLHL29Q96CT2 875 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 EPN3Q9H201 632 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 ST7Q9NRC1 585 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 TXNDC16Q9P2K2 825 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 GAS8O95995 478 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 USP14P54578 494 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 RNASELQ05823 741 aaKnown RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 CADPS2Q86UW7 1296 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 CMTR1Q8N1G2 835 aaKnown RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PCDHA12Q9UN75 941 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 TNKSO95271 1327 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 LDHBP07195 334 aaKnown RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 CORO7P57737 925 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 SAAL1Q96ER3 474 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PAGE5Q96GU1 130 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PSMD1Q99460 953 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 SEPT6Q14141 434 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 OSBPL9Q96SU4 736 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 MRPL44Q9H9J2 332 aaKnown RBP5.25□□□□□ -1.57
CSMD3-203ENST00000343508 PCDHA4Q9UN74 947 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 DCTN3O75935 186 aa5.25□□□□□ -1.57
CSMD3-203ENST00000343508 LMNAP02545 664 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms