RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 GREM2Q9H772 168 aa16.53■□□□□ 0.24
CLCN1-201ENST00000343257 PCDHA13Q9Y5I0 950 aa16.53■□□□□ 0.24
CLCN1-201ENST00000343257 CYP2D7A0A087X1C5 515 aa16.53■□□□□ 0.24
CLCN1-201ENST00000343257 EIF4A3P38919 411 aaKnown RBP16.53■□□□□ 0.24
CLCN1-201ENST00000343257 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
CLCN1-201ENST00000343257 SDR42E1Q8WUS8 393 aa16.53■□□□□ 0.24
CLCN1-201ENST00000343257 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 RASSF7Q02833 373 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 KLHL7Q8IXQ5 586 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 TBC1D31Q96DN5 1066 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 KRT12Q99456 494 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 NOC4LQ9BVI4 516 aaKnown RBP16.52■□□□□ 0.24
CLCN1-201ENST00000343257 VCPKMTQ9H867 229 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 MCM8Q9UJA3 840 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 MTMR7Q9Y216 660 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 ANO9A1A5B4 782 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 ITGA6P23229 1130 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 HLTFQ14527 1009 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLCN1-201ENST00000343257 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 EMBQ6PCB8 327 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 TRIM58Q8NG06 486 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 TNKSO95271 1327 aa16.52■□□□□ 0.24
CLCN1-201ENST00000343257 EPHB6O15197 1021 aa16.52■□□□□ 0.23
CLCN1-201ENST00000343257 ODF2Q5BJF6 829 aa16.52■□□□□ 0.23
CLCN1-201ENST00000343257 ADSSL1Q8N142 457 aa16.52■□□□□ 0.23
CLCN1-201ENST00000343257 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.23
CLCN1-201ENST00000343257 DDX20Q9UHI6 824 aaKnown RBP16.52■□□□□ 0.23
CLCN1-201ENST00000343257 MYH10P35580 1976 aa16.52■□□□□ 0.23
CLCN1-201ENST00000343257 NFAT5O94916 1531 aa16.52■□□□□ 0.23
CLCN1-201ENST00000343257 FTCDO95954 541 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 DNM2P50570 870 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 CLNS1AP54105 237 aaKnown RBP16.51■□□□□ 0.23
CLCN1-201ENST00000343257 NLRP5P59047 1200 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 HYOU1Q9Y4L1 999 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 MDH1P40925 334 aaKnown RBP16.51■□□□□ 0.23
CLCN1-201ENST00000343257 QPCTQ16769 361 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
CLCN1-201ENST00000343257 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
CLCN1-201ENST00000343257 MIEF2Q96C03 454 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 CNOT6LQ96LI5 555 aaKnown RBP16.51■□□□□ 0.23
CLCN1-201ENST00000343257 PHF20Q9BVI0 1012 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 PLAAQ9Y263 795 aa16.51■□□□□ 0.23
CLCN1-201ENST00000343257 FAM170AA1A519 330 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 ZBED6P86452 979 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 NAA25Q14CX7 972 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 SLC4A8Q2Y0W8 1093 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 ARHGAP20Q9P2F6 1191 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 TCRBV5S4A2TA0A5A2 114 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 MAGEA1P43355 309 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 KIF11P52732 1056 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 DDR1Q08345 913 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 MEA1Q16626 185 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 KDM7AQ6ZMT4 941 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 RMND1Q9NWS8 449 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 MYH13Q9UKX3 1938 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 DNM1LO00429 736 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 PSMA7O14818 248 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 SRGNP10124 158 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
CLCN1-201ENST00000343257 GFPT1Q06210 699 aaPredicted RBP16.5■□□□□ 0.23
CLCN1-201ENST00000343257 SNCBQ16143 134 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 PREPLQ4J6C6 727 aaPredicted RBP16.5■□□□□ 0.23
CLCN1-201ENST00000343257 RRAGAQ7L523 313 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 CYFIP2Q96F07 1278 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 SOS2Q07890 1332 aaPredicted RBP16.5■□□□□ 0.23
CLCN1-201ENST00000343257 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
CLCN1-201ENST00000343257 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
CLCN1-201ENST00000343257 KIF1CO43896 1103 aaKnown RBP16.49■□□□□ 0.23
CLCN1-201ENST00000343257 SMTNP53814 917 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 ATP2C1P98194 919 aaPredicted RBP16.49■□□□□ 0.23
CLCN1-201ENST00000343257 IFT20Q8IY31 132 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 CASKIN2Q8WXE0 1202 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
CLCN1-201ENST00000343257 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 ALS2CR12Q96Q35 445 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 FAM228AQ86W67 206 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 DDX42Q86XP3 938 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLCN1-201ENST00000343257 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 IQCKQ8N0W5 287 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 ECM29Q5VYK3 1845 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 UBR1Q8IWV7 1749 aa16.49■□□□□ 0.23
CLCN1-201ENST00000343257 A0A1W2PQC6 194 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 RASSF9O75901 435 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 CYB5D1Q6P9G0 228 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 TPX2Q9ULW0 747 aaKnown RBP16.48■□□□□ 0.23
CLCN1-201ENST00000343257 RIPOR2Q9Y4F9 1068 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 FCER1AP12319 257 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 ARID5AQ03989 594 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
CLCN1-201ENST00000343257 CCDC170Q8IYT3 715 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms