RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MAGEB6Q8N7X4 407 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 GIMAP8Q8ND71 665 aaPredicted RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 DUSP9Q99956 384 aaKnown RBP10.77□□□□□ -0.69
HOXA1-201ENST00000343060 UBAC1Q9BSL1 405 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 RABEP2Q9H5N1 569 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 LRWD1Q9UFC0 647 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 MCM8Q9UJA3 840 aa10.77□□□□□ -0.69
HOXA1-201ENST00000343060 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 CNTNAP5Q8WYK1 1306 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 ERVV-2B6SEH9 535 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PSMA7O14818 248 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PJA2O43164 708 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PPP1R37O75864 691 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 TDO2P48775 406 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 RRP12Q5JTH9 1297 aaKnown RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 WLSQ5T9L3 541 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 TTC19Q6DKK2 380 aaPredicted RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 C4orf32Q8N8J7 132 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 ZKSCAN4Q969J2 545 aaPredicted RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 FAM89AQ96GI7 184 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 RNPC3Q96LT9 517 aaKnown RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 TUBGCP2Q9BSJ2 902 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 MAGEC2Q9UBF1 373 aaPredicted RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 ZNF142P52746 1687 aaPredicted RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PRKAB2O43741 272 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PRDM1O75626 825 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 CTSWP56202 376 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 CYP27A1Q02318 531 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 SPA17Q15506 151 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 MIIPQ5JXC2 388 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 LCORLQ8N3X6 602 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 SH2D3CQ8N5H7 860 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 SPATA5Q8NB90 893 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 C3orf20Q8ND61 904 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PIK3R5Q8WYR1 880 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 DHTKD1Q96HY7 919 aaPredicted RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 CCDC85AQ96PX6 553 aaPredicted RBP10.76□□□□□ -0.69
HOXA1-201ENST00000343060 GREM2Q9H772 168 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 DISC1Q9NRI5 854 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 PLAGL2Q9UPG8 496 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 MAPK8IP1Q9UQF2 711 aa10.76□□□□□ -0.69
HOXA1-201ENST00000343060 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 PLEKHA8P1O95397 391 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 SLC7A5Q01650 507 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 PAK2Q13177 524 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 NEDD9Q14511 834 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 PUM3Q15397 648 aaKnown RBP10.75□□□□□ -0.69
HOXA1-201ENST00000343060 C8orf74Q6P047 294 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 NFRKBQ6P4R8 1299 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 TMTC3Q6ZXV5 915 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 MYCBPAPQ8TBZ2 947 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 SMCR8Q8TEV9 937 aaPredicted RBP10.75□□□□□ -0.69
HOXA1-201ENST00000343060 LPIN2Q92539 896 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
HOXA1-201ENST00000343060 ALS2CR12Q96Q35 445 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 MLXIPQ9HAP2 919 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 RNF14Q9UBS8 474 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 PCDHA13Q9Y5I0 950 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 C1orf167Q5SNV9 1468 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 TMCO5BA8MYB1 307 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 H0YHG0 523 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 DDAH1O94760 285 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 FAM107AO95990 144 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 NR1D1P20393 614 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 STAT6P42226 847 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 KLK7P49862 253 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 CCDC96Q2M329 555 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 FAM114A1Q8IWE2 563 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
HOXA1-201ENST00000343060 ESR2Q92731 530 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 CCDC42Q96M95 316 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 IFIH1Q9BYX4 1025 aaKnown RBP10.75□□□□□ -0.69
HOXA1-201ENST00000343060 CNNM1Q9NRU3 951 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 TSKSQ9UJT2 592 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 SLC4A4Q9Y6R1 1079 aa10.75□□□□□ -0.69
HOXA1-201ENST00000343060 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
HOXA1-201ENST00000343060 MYH10P35580 1976 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 HMGB1P1B2RPK0 211 aaPredicted RBP10.74□□□□□ -0.69
HOXA1-201ENST00000343060 MOCS3O95396 460 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 CALM1P0DP23 149 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 CALM2P0DP24 149 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 CALM3P0DP25 149 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 CCNE1P24864 410 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 MDH1P40925 334 aaKnown RBP10.74□□□□□ -0.69
HOXA1-201ENST00000343060 TBC1D8BQ0IIM8 1120 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 TROAPQ12815 778 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 RASGRF1Q13972 1273 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 COBLL1Q53SF7 1204 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 CFAP58Q5T655 872 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 PPP4R3AQ6IN85 833 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 NLRP14Q86W24 1093 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 CCDC13Q8IYE1 715 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 MAGEC3Q8TD91 643 aa10.74□□□□□ -0.69
HOXA1-201ENST00000343060 ATP6V1G3Q96LB4 118 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms