RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 HOXD10P28358 340 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 PSMC4P43686 418 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 GNAQP50148 359 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 GUCY1B3Q02153 619 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 CATSPERGQ6ZRH7 1159 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 P2RX7Q99572 595 aaKnown RBP10.04□□□□□ -0.8
NLRC4-201ENST00000342905 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 ARHGAP39Q9C0H5 1083 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 GJB4Q9NTQ9 266 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 PTPN22Q9Y2R2 807 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 KIAA1217Q5T5P2 1943 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 CENPFP49454 3210 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 LCTP09848 1927 aa10.04□□□□□ -0.8
NLRC4-201ENST00000342905 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 KLRF2D3W0D1 207 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
NLRC4-201ENST00000342905 CAP1Q01518 475 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 ZNF543Q08ER8 600 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 PKN1Q16512 942 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 ASPRV1Q53RT3 343 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 LBX2Q6XYB7 198 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 CLEC17AQ6ZS10 378 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 SPICE1Q8N0Z3 855 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 GPRC5AQ8NFJ5 357 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 WASF1Q92558 559 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 CHAMP1Q96JM3 812 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 CPVLQ9H3G5 476 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 SRRDQ9UH36 339 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 MYPNQ86TC9 1320 aa10.03□□□□□ -0.8
NLRC4-201ENST00000342905 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.8
NLRC4-201ENST00000342905 CYTH3O43739 400 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 CTGFP29279 349 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 AKAP17AQ02040 695 aaKnown RBP10.02□□□□□ -0.8
NLRC4-201ENST00000342905 RESTQ13127 1097 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 COG2Q14746 738 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 CCDC96Q2M329 555 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 SLFN13Q68D06 897 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 KRT40Q6A162 431 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 FERMT3Q86UX7 667 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 MB21D1Q8N884 522 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 GMCL1P1Q8NEA9 526 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 FBXO18Q8NFZ0 1043 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 DCAF4Q8WV16 495 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 PIBF1Q8WXW3 757 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 SHISA4Q96DD7 197 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 LZTS2Q9BRK4 669 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 SPZ1Q9BXG8 430 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 HOXC10Q9NYD6 342 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 RABGAP1Q9Y3P9 1069 aa10.02□□□□□ -0.8
NLRC4-201ENST00000342905 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.8
NLRC4-201ENST00000342905 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 F5H6K3 240 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 RAD21O60216 631 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 FLOT1O75955 427 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 NDUFB10O96000 172 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 SCG2P13521 617 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 SMARCA1P28370 1054 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 MAPK4P31152 587 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 ERVK-24P63145 666 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 CCNA1P78396 465 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 KLRC3Q07444 240 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 KIAA1755Q5JYT7 1200 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 TTBK2Q6IQ55 1244 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 KCTD1Q719H9 257 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 RGS22Q8NE09 1264 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 COA7Q96BR5 231 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 UBA5Q9GZZ9 404 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 TXNRD2Q9NNW7 524 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 RBPJLQ9UBG7 517 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 PTCH2Q9Y6C5 1203 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 PLXNA1Q9UIW2 1896 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 CCDC85CA6NKD9 419 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 MCM4P33991 863 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 SLC1A4P43007 532 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 PRKCZQ05513 592 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 TRIM29Q14134 588 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 PFKFB3Q16875 520 aaPredicted RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 GPATCH4Q5T3I0 446 aaKnown RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 MCTP1Q6DN14 999 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 CCAR1Q8IX12 1150 aaKnown RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 RAET1EQ8TD07 263 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 NUP88Q99567 741 aaPredicted RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 PAGR1Q9BTK6 254 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 RIOX1Q9H6W3 641 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 VPS54Q9P1Q0 977 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 RBM27Q9P2N5 1060 aaKnown RBP10.01□□□□□ -0.81
NLRC4-201ENST00000342905 KCNJ14Q9UNX9 436 aa10.01□□□□□ -0.81
NLRC4-201ENST00000342905 PCDHB13Q9Y5F0 798 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms