RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 ELF2Q15723 593 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 CAVIN4Q5BKX8 364 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
CFAP54-201ENST00000342887 HAS1Q92839 578 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 BORCS6Q96GS4 357 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 DHTKD1Q96HY7 919 aaPredicted RBP9.17□□□□□ -0.94
CFAP54-201ENST00000342887 CD209Q9NNX6 404 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 PDHBP11177 359 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 COPB1P53618 953 aaKnown RBP9.17□□□□□ -0.94
CFAP54-201ENST00000342887 TPD52L1Q16890 204 aaPredicted RBP9.17□□□□□ -0.94
CFAP54-201ENST00000342887 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
CFAP54-201ENST00000342887 SPTY2D1Q68D10 685 aaPredicted RBP9.17□□□□□ -0.94
CFAP54-201ENST00000342887 BIN1O00499 593 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 CYP2C19P33261 490 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 SHMT1P34896 483 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 TUBB4BP68371 445 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 ZNF827Q17R98 1081 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 MB21D1Q8N884 522 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 RETREG2Q8NC44 543 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 NOC3LQ8WTT2 800 aaKnown RBP9.16□□□□□ -0.94
CFAP54-201ENST00000342887 IQCDQ96DY2 449 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 SEMA6BQ9H3T3 888 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 SWAP70Q9UH65 585 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 ZNF236Q9UL36 1845 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 AKR1B15C9JRZ8 316 aaPredicted RBP9.16□□□□□ -0.94
CFAP54-201ENST00000342887 OPLAHO14841 1288 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 FOSBP53539 338 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 SYT10Q6XYQ8 523 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 CCDC9Q9Y3X0 531 aaKnown RBP9.16□□□□□ -0.94
CFAP54-201ENST00000342887 CASP1P29466 404 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 GOLGA8FQ08AF8 430 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 GOLGA8DPQ0D2H9 430 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
CFAP54-201ENST00000342887 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 LRP2BPQ9P2M1 347 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 L1RE1Q9UN81 338 aa9.16□□□□□ -0.94
CFAP54-201ENST00000342887 PVALEFA0A1B0GWK0 134 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 NOL4O94818 638 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 PRPF6O94906 941 aaKnown RBP9.15□□□□□ -0.94
CFAP54-201ENST00000342887 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 SP8Q8IXZ3 490 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 KCTD17Q8N5Z5 321 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 TBC1D16Q8TBP0 767 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 KCTD10Q9H3F6 313 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 RCCD1A6NED2 376 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 BECN2A8MW95 431 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 CDK8P49336 464 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 TCEAL1Q15170 157 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 IQCA1Q86XH1 822 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 SYN2Q92777 582 aaPredicted RBP9.15□□□□□ -0.94
CFAP54-201ENST00000342887 UBAC1Q9BSL1 405 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 IDI2Q9BXS1 227 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 EDEM3Q9BZQ6 932 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 RIC8AQ9NPQ8 531 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 MTMR4Q9NYA4 1195 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 TMEM59LQ9UK28 342 aa9.15□□□□□ -0.94
CFAP54-201ENST00000342887 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 ZSCAN12O43309 604 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 CDK11BP21127 795 aaKnown RBP9.15□□□□□ -0.95
CFAP54-201ENST00000342887 HOXD13P35453 343 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 GNAQP50148 359 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 TRIM29Q14134 588 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 HHIPL2Q6UWX4 724 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 EP400NLQ6ZTU2 488 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.95
CFAP54-201ENST00000342887 DDX4Q9NQI0 724 aaKnown RBP9.15□□□□□ -0.95
CFAP54-201ENST00000342887 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.15□□□□□ -0.95
CFAP54-201ENST00000342887 HOOK1Q9UJC3 728 aaKnown RBP9.15□□□□□ -0.95
CFAP54-201ENST00000342887 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.95
CFAP54-201ENST00000342887 TARSL2A2RTX5 802 aaKnown RBP9.14□□□□□ -0.95
CFAP54-201ENST00000342887 EIF3CLB5ME19 914 aaKnown RBP9.14□□□□□ -0.95
CFAP54-201ENST00000342887 SMC2O95347 1197 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 PPP1R2P41236 205 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 GSTO1P78417 241 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 ERCC6LQ2NKX8 1250 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 ETNPPLQ8TBG4 499 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 EIF3CQ99613 913 aaKnown RBP9.14□□□□□ -0.95
CFAP54-201ENST00000342887 CCDC151A5D8V7 595 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 TOP1P11387 765 aaKnown RBP9.14□□□□□ -0.95
CFAP54-201ENST00000342887 SLC20A2Q08357 652 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 SRGAP1Q7Z6B7 1085 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 CNGA4Q8IV77 575 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 NLRP3Q96P20 1036 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 VIPAS39Q9H9C1 493 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 PLAGL2Q9UPG8 496 aa9.14□□□□□ -0.95
CFAP54-201ENST00000342887 BAZ2BQ9UIF8 2168 aaKnown RBP9.14□□□□□ -0.95
CFAP54-201ENST00000342887 CIITAP33076 1130 aa9.13□□□□□ -0.95
CFAP54-201ENST00000342887 HDLBPQ00341 1268 aaKnown RBP9.13□□□□□ -0.95
CFAP54-201ENST00000342887 PAK1Q13153 545 aa9.13□□□□□ -0.95
CFAP54-201ENST00000342887 SLC15A2Q16348 729 aa9.13□□□□□ -0.95
CFAP54-201ENST00000342887 APOBEC3HQ6NTF7 200 aaKnown RBP9.13□□□□□ -0.95
CFAP54-201ENST00000342887 TMTC1Q8IUR5 882 aa9.13□□□□□ -0.95
CFAP54-201ENST00000342887 ZBED3Q96IU2 234 aaPredicted RBP9.13□□□□□ -0.95
CFAP54-201ENST00000342887 FIZ1Q96SL8 496 aa9.13□□□□□ -0.95
CFAP54-201ENST00000342887 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms