RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PROSER3Q2NL68 480 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 PALM2Q8IXS6 379 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 CARD6Q9BX69 1037 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
UBE3B-202ENST00000342494 DISC1Q9NRI5 854 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 KIAA1024Q9UPX6 916 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 ESYT2A0FGR8 921 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 TYW5A2RUC4 315 aaKnown RBP16.46■□□□□ 0.23
UBE3B-202ENST00000342494 PFDN6O15212 129 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-202ENST00000342494 PSMD6Q15008 389 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 CEP85LQ5SZL2 805 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 KIAA1841Q6NSI8 718 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 RSRC2Q7L4I2 434 aaKnown RBP16.46■□□□□ 0.23
UBE3B-202ENST00000342494 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 RNF8O76064 485 aa16.46■□□□□ 0.22
UBE3B-202ENST00000342494 BMP3P12645 472 aa16.46■□□□□ 0.22
UBE3B-202ENST00000342494 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.22
UBE3B-202ENST00000342494 PTPREP23469 700 aa16.46■□□□□ 0.22
UBE3B-202ENST00000342494 TTLL6Q8N841 843 aa16.46■□□□□ 0.22
UBE3B-202ENST00000342494 MYOM2P54296 1465 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 PTGDRQ13258 359 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 SLC10A4Q96EP9 437 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-202ENST00000342494 LONP1P36776 959 aaKnown RBP16.45■□□□□ 0.22
UBE3B-202ENST00000342494 DYNLL1P63167 89 aaKnown RBP16.45■□□□□ 0.22
UBE3B-202ENST00000342494 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 OR8K1Q8NGG5 319 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 AFAP1L1Q8TED9 768 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 CSPG5O95196 566 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 NPR1P16066 1061 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 SLC17A8Q8NDX2 589 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 CDHR1Q96JP9 859 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 KRT12Q99456 494 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 XPAP23025 273 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-202ENST00000342494 P3H4Q92791 437 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 CCDC51Q96ER9 411 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 USP28Q96RU2 1077 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 CCDC68Q9H2F9 335 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 ZMYM4Q5VZL5 1548 aa16.45■□□□□ 0.22
UBE3B-202ENST00000342494 ZNF131P52739 623 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 KIAA1468Q9P260 1216 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 STAT2P52630 851 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 CCDC62Q6P9F0 684 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 GPATCH11Q8N954 259 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 ADCY9O60503 1353 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 USP17L3A6NCW0 530 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 USP17L4A6NCW7 530 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 CCND2P30279 289 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 SLC16A2P36021 539 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 NSFP46459 744 aaKnown RBP16.44■□□□□ 0.22
UBE3B-202ENST00000342494 USP17L1Q7RTZ2 530 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 MMP10P09238 476 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 ANKRD36BP1Q96IX9 119 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 POLR2FP61218 127 aaKnown RBP16.44■□□□□ 0.22
UBE3B-202ENST00000342494 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
UBE3B-202ENST00000342494 RPN1P04843 607 aaKnown RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 MAP7Q14244 749 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 WDR11Q9BZH6 1224 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 TPCN1Q9ULQ1 816 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 SSH2Q76I76 1423 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 DISP1Q96F81 1524 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 HGSO14964 777 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 RPS6KA2Q15349 733 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 GRK7Q8WTQ7 553 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 PKNOX2Q96KN3 472 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 SRP68Q9UHB9 627 aaKnown RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 DBNLQ9UJU6 430 aaKnown RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 METP08581 1390 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 A6NJR5 290 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 ADKP55263 362 aaKnown RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 PTK2Q05397 1052 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 DENND2CQ68D51 928 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 VSIG1Q86XK7 387 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 MCUR1Q96AQ8 359 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
UBE3B-202ENST00000342494 XPO4Q9C0E2 1151 aaKnown RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-202ENST00000342494 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 ERVV-1B6SEH8 477 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 SYMPKQ92797 1274 aaKnown RBP16.42■□□□□ 0.22
UBE3B-202ENST00000342494 PLCB1Q9NQ66 1216 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 U2AF2P26368 475 aaKnown RBP eCLIP16.42■□□□□ 0.224e-7■■■□□ 17.3
UBE3B-202ENST00000342494 ADCY8P40145 1251 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 BBS5Q8N3I7 341 aa16.42■□□□□ 0.22
UBE3B-202ENST00000342494 SKA2Q8WVK7 121 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-202ENST00000342494 CEP170P1Q96L14 293 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms