RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 AFMP43652 599 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 DNM2P50570 870 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 PPP2R2AP63151 447 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 BYSLQ13895 437 aaKnown RBP20.5■□□□□ 0.87
SMPD1-201ENST00000342245 ZNF268Q14587 947 aaPredicted RBP20.5■□□□□ 0.87
SMPD1-201ENST00000342245 KLHL23Q8NBE8 558 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 CNOT10Q9H9A5 744 aaKnown RBP20.5■□□□□ 0.87
SMPD1-201ENST00000342245 PLAAQ9Y263 795 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 RCCD1A6NED2 376 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 ORC4O43929 436 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 BMP15O95972 392 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 HPDP32754 393 aaPredicted RBP20.5■□□□□ 0.87
SMPD1-201ENST00000342245 ZBED6P86452 979 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 ROR2Q01974 943 aaKnown RBP20.5■□□□□ 0.87
SMPD1-201ENST00000342245 GCKRQ14397 625 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 SEPT2Q15019 361 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 RAB11FIP4Q86YS3 637 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 USHBP1Q8N6Y0 703 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 CCDC197Q8NCU1 140 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 SH2D4AQ9H788 454 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 SENP2Q9HC62 589 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 SLC12A4Q9UP95 1085 aa20.5■□□□□ 0.87
SMPD1-201ENST00000342245 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 ABLIM1O14639 778 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 ITIH4Q14624 930 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 NTRK3Q16288 839 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 TBC1D25Q3MII6 688 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 RABL6Q3YEC7 729 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 THEMISQ8N1K5 641 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 NOC3LQ8WTT2 800 aaKnown RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 CENPTQ96BT3 561 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 LRRC45Q96CN5 670 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 TMEM87BQ96K49 555 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 HINFPQ9BQA5 517 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 NDST4Q9H3R1 872 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 ZBTB12Q9Y330 459 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 PDS5AQ29RF7 1337 aaKnown RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 ZBTB43O43298 467 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 FMNL1O95466 1100 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 IGKV5-2P06315 115 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 CARSP49589 748 aaKnown RBP20.49■□□□□ 0.87
SMPD1-201ENST00000342245 QPCTQ16769 361 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 APOA5Q6Q788 366 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 PHKBQ93100 1093 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 EPB41L5Q9HCM4 733 aa20.49■□□□□ 0.87
SMPD1-201ENST00000342245 HEG1Q9ULI3 1381 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 H7C1W4 665 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 HEXIM1O94992 359 aaKnown RBP20.48■□□□□ 0.87
SMPD1-201ENST00000342245 FGAP02671 866 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 GCLCP48506 637 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-201ENST00000342245 PAPOLAP51003 745 aaKnown RBP20.48■□□□□ 0.87
SMPD1-201ENST00000342245 PPARAQ07869 468 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 IFI16Q16666 785 aaKnown RBP20.48■□□□□ 0.87
SMPD1-201ENST00000342245 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 C14orf37Q86TY3 774 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 DIS3L2Q8IYB7 885 aaKnown RBP20.48■□□□□ 0.87
SMPD1-201ENST00000342245 ABTB2Q8N961 1025 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 ZNF507Q8TCN5 953 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 ZFAND2BQ8WV99 257 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 NELFBQ8WX92 580 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 FERMT2Q96AC1 680 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 ZNF570Q96NI8 536 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 SLC5A4Q9NY91 659 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 TFR2Q9UP52 801 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 PCDHGC5Q9Y5F6 944 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-201ENST00000342245 ABCC12Q96J65 1359 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 GRID2IPA4D2P6 1211 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 CCNG1P51959 295 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 HAND2P61296 217 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 PROSER3Q2NL68 480 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 THEMIS2Q5TEJ8 643 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 RAPGEF5Q92565 580 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
SMPD1-201ENST00000342245 BTBD18B2RXH4 712 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 COQ9O75208 318 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 PARP1P09874 1014 aaKnown RBP20.47■□□□□ 0.87
SMPD1-201ENST00000342245 FAM153BP0C7A2 387 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 FAM153CQ494X1 144 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 SMYD4Q8IYR2 804 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-201ENST00000342245 IFT81Q8WYA0 676 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMPD1-201ENST00000342245 FAM153AQ9UHL3 310 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 STXBP3O00186 592 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 KCNQ3O43525 872 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 GLI1P08151 1106 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 GUCY2DQ02846 1103 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 PSMD2Q13200 908 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 EPHA10Q5JZY3 1008 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 ZNF658Q5TYW1 1059 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-201ENST00000342245 YIPF3Q9GZM5 350 aa20.47■□□□□ 0.87
SMPD1-201ENST00000342245 RBM12Q9NTZ6 932 aaKnown RBP20.47■□□□□ 0.87
SMPD1-201ENST00000342245 A0A1W2PQJ5 194 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 DRD4P21917 467 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 LMNB2Q03252 620 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 SNX1Q13596 522 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 MTMR3Q13615 1198 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms