RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CALML3P27482 149 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 INPP5BP32019 993 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 FOXP4Q8IVH2 680 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 SYMPKQ92797 1274 aaKnown RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 PSMD1Q99460 953 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 CEP131Q9UPN4 1083 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 ERCC3P19447 782 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 LMOD1P29536 600 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-201ENST00000342220 ZNF76P36508 570 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 TECP42680 631 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 CCZ1BP86790 482 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 CCZ1P86791 482 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-201ENST00000342220 RAD51AP2Q09MP3 1159 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 PLS1Q14651 629 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 CCDC125Q86Z20 511 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 DEFB129Q9H1M3 183 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 PAXBP1Q9Y5B6 917 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 ZNF541Q9H0D2 1346 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 SMC2O95347 1197 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 UBA7P41226 1012 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 GABPAQ06546 454 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
COL18A1-201ENST00000342220 PPP2R5BQ15173 497 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 TRMT44Q8IYL2 757 aaKnown RBP14.75□□□□□ -0.05
COL18A1-201ENST00000342220 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
COL18A1-201ENST00000342220 POLD4Q9HCU8 107 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 GGA3Q9NZ52 723 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 PCDHA4Q9UN74 947 aa14.75□□□□□ -0.05
COL18A1-201ENST00000342220 LOC102724159A0A0B4J2E5 919 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 A0A1W2PQ27 194 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 A0A1W2PQ64 194 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 A0A1W2PQD8 194 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 PALM3A6NDB9 673 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 SORBS3O60504 671 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 PWP2Q15269 919 aaKnown RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 CCDC17Q96LX7 622 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 JMJD4Q9H9V9 463 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 KIAA1468Q9P260 1216 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 NEMFO60524 1076 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 CDC37Q16543 378 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 QRICH1Q2TAL8 776 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 TRPM4Q8TD43 1214 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 PSTPIP2Q9H939 334 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 FEZ2Q9UHY8 353 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 KCNG1Q9UIX4 513 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 STK36Q9NRP7 1315 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 ADCY7P51828 1080 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 ZNF543Q08ER8 600 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 AXDND1Q5T1B0 1012 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 TMEM179Q6ZVK1 233 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 TSPYL1Q9H0U9 437 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 TMEM60Q9H2L4 133 aa14.74□□□□□ -0.05
COL18A1-201ENST00000342220 DDX41Q9UJV9 622 aaKnown RBP14.74□□□□□ -0.05
COL18A1-201ENST00000342220 TNS1Q9HBL0 1735 aaKnown RBP14.73□□□□□ -0.05
COL18A1-201ENST00000342220 GNA11P29992 359 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 SPP2Q13103 211 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 ARHGEF10LQ9HCE6 1279 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 STXBP3O00186 592 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 BMP3P12645 472 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 PTPN14Q15678 1187 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 WDR78Q5VTH9 848 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 CNPY4Q8N129 248 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 WRNIP1Q96S55 665 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 BARHL2Q9NY43 387 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 TDP2O95551 362 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 NONOQ15233 471 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL18A1-201ENST00000342220 PTPAQ15257 358 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 DTHD1Q6ZMT9 781 aa14.73□□□□□ -0.05
COL18A1-201ENST00000342220 CCDC12Q8WUD4 166 aaPredicted RBP14.73□□□□□ -0.05
COL18A1-201ENST00000342220 PRR29P0C7W0 189 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 CMA1P23946 247 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 PRELPP51888 382 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 NYAP1Q6ZVC0 841 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 MAP3K14Q99558 947 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 RSPH14Q9UHP6 348 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 CHMP2AO43633 222 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 KRT222Q8N1A0 295 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 CDK5RAP3Q96JB5 506 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 IDI2Q9BXS1 227 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 XPO4Q9C0E2 1151 aaKnown RBP14.72□□□□□ -0.05
COL18A1-201ENST00000342220 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
COL18A1-201ENST00000342220 CUTAO60888 179 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 PTGER2P43116 358 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 ASPRV1Q53RT3 343 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 CCAR2Q8N163 923 aaKnown RBP14.71□□□□□ -0.05
COL18A1-201ENST00000342220 TBC1D5Q92609 795 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 IFNKQ9P0W0 207 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 ZBTB21Q9ULJ3 1066 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 KIAA1551Q9HCM1 1747 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 NRXN2Q9P2S2 1712 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 IDEP14735 1019 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 TXLNAP40222 546 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 SP4Q02446 784 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms