RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 TLDC2A0PJX2 215 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 POTEMA6NI47 508 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 EBAG9O00559 213 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 DPYDQ12882 1025 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 UBE2SQ16763 222 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 CLEC10AQ8IUN9 316 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 PHF20Q9BVI0 1012 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 TMEM260Q9NX78 707 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 TBCAO75347 108 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 ADCY7P51828 1080 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 VPS36Q86VN1 386 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 GJA10Q969M2 543 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 MLXIPQ9HAP2 919 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 WNT7AO00755 349 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 CDR1P51861 262 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 RASGRP2Q7LDG7 609 aa12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 TCRBV5S4A2TA0A5A2 114 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 SYCP3Q8IZU3 236 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 PNKPQ96T60 521 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 NUP58Q9BVL2 599 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 ZC3H12CQ9C0D7 883 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 CEP104O60308 925 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 FTCDO95954 541 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 MNAT1P51948 309 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 ATP2C1P98194 919 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 CYP4A11Q02928 519 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 KLHL30Q0D2K2 578 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 IPO4Q8TEX9 1081 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 ZBTB21Q9ULJ3 1066 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 NCK2O43639 380 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 ABL1P00519 1130 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 EHHADHQ08426 723 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 TRAPPC3LQ5T215 181 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 NOX5Q96PH1 765 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 SAMM50Q9Y512 469 aa12.3□□□□□ -0.44
SEMA4D-201ENST00000339861 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 SASH3O75995 380 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 ERLIN2O94905 339 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 GPATCH11Q8N954 259 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 PPP1R12BO60237 982 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 ERVK-24P63145 666 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 TROAPQ12815 778 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 SLC9C1Q4G0N8 1177 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 TMEM47Q9BQJ4 181 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 DUSP10Q9Y6W6 482 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 RDXP35241 583 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 TRAPPC10P48553 1259 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 ITPK1Q13572 414 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 LLGL1Q15334 1064 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 NAA35Q5VZE5 725 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 MMS19Q96T76 1030 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 BSDC1Q9NW68 430 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 XDHP47989 1333 aa12.29□□□□□ -0.44
SEMA4D-201ENST00000339861 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 ACTN2P35609 894 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 CCT5P48643 541 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 SNAP25P60880 206 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 TUBB2AQ13885 445 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 UBLCP1Q8WVY7 318 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 TUBB2BQ9BVA1 445 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 FAM208AQ9UK61 1670 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 MEIS1O00470 390 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 TRIM66O15016 1216 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 OPA1O60313 960 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 GUCY2DQ02846 1103 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 NSUN4Q96CB9 384 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 PCDHA12Q9UN75 941 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 KRT13P13646 458 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 EEF1GP26641 437 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 LIG3P49916 1009 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 MRPL12P52815 198 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 GNGT1P63211 74 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms