RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 WDR24Q96S15 920 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 OGFRQ9NZT2 677 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 PCDHA6Q9UN73 950 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 PCDHA8Q9Y5H6 950 aa18.41■□□□□ 0.54
LITAF-201ENST00000339430 GTPBP6O43824 516 aaPredicted RBP18.4■□□□□ 0.54
LITAF-201ENST00000339430 STAT6P42226 847 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 NFIAQ12857 509 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 ARHGAP27Q6ZUM4 889 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 RASSF8Q8NHQ8 419 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 TMEM60Q9H2L4 133 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 DDX41Q9UJV9 622 aaKnown RBP18.4■□□□□ 0.54
LITAF-201ENST00000339430 GDAQ9Y2T3 454 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 FOCADQ5VW36 1801 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 RASA1P20936 1047 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 FILIP1LQ4L180 1135 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 PRMT6Q96LA8 375 aaPredicted RBP18.4■□□□□ 0.54
LITAF-201ENST00000339430 CARD6Q9BX69 1037 aa18.4■□□□□ 0.54
LITAF-201ENST00000339430 ROBO3Q96MS0 1386 aa18.39■□□□□ 0.54
LITAF-201ENST00000339430 RPN1P04843 607 aaKnown RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 LONP1P36776 959 aaKnown RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 TXLNAP40222 546 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 ARL6IP4Q66PJ3 421 aaKnown RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 ANKS1AQ92625 1134 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 VPS16Q9H269 839 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 MRPL44Q9H9J2 332 aaKnown RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 SH3GLB2Q9NR46 395 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 MYH1P12882 1939 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 M0R2N6 131 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 ZSCAN20P17040 1043 aaPredicted RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 CASQ1P31415 396 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 CASP14P31944 242 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 PBX1P40424 430 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 ARHGAP29Q52LW3 1261 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 MNS1Q8NEH6 495 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 AGBL3Q8NEM8 1001 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 CTAGE1Q96RT6 745 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 TDRD3Q9H7E2 651 aaKnown RBP18.39■□□□□ 0.53
LITAF-201ENST00000339430 HDAC9Q9UKV0 1011 aa18.39■□□□□ 0.53
LITAF-201ENST00000339430 A0A0U1RQJ8 604 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 STXBP3O00186 592 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 GNAQP50148 359 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 PAK1Q13153 545 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 KRT31Q15323 416 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 RAD9BQ6WBX8 426 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 DTHD1Q6ZMT9 781 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 ATRIPQ8WXE1 791 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 IRX2Q9BZI1 471 aaPredicted RBP18.38■□□□□ 0.53
LITAF-201ENST00000339430 KLRF2D3W0D1 207 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 TNIP1Q15025 636 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 PANX2Q96RD6 677 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 LZTFL1Q9NQ48 299 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 DISC1Q9NRI5 854 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 TAB2Q9NYJ8 693 aa18.38■□□□□ 0.53
LITAF-201ENST00000339430 N4BP3O15049 544 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 FXR1P51114 621 aaKnown RBP eCLIP18.37■□□□□ 0.53
LITAF-201ENST00000339430 TCP10Q12799 353 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 ZNF658Q5TYW1 1059 aaPredicted RBP18.37■□□□□ 0.53
LITAF-201ENST00000339430 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
LITAF-201ENST00000339430 BARHL2Q9NY43 387 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 PALM3A6NDB9 673 aaPredicted RBP18.37■□□□□ 0.53
LITAF-201ENST00000339430 GOLGA6L9A6NEM1 432 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 MFAP3LO75121 409 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 GYPCP04921 128 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 PRCPP42785 496 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 CDK8P49336 464 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 ZFPM1Q8IX07 1006 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 CCDC148Q8NFR7 591 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 VAT1LQ9HCJ6 419 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 ZNF446Q9NWS9 450 aa18.37■□□□□ 0.53
LITAF-201ENST00000339430 TRIM49BA6NDI0 452 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 SPDYE2BA6NHP3 402 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 FZD9O00144 591 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 SPDYE6P0CI01 402 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 DLGAP5Q15398 846 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 NAALADL2Q58DX5 795 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 UBXN4Q92575 508 aa18.36■□□□□ 0.53
LITAF-201ENST00000339430 CCDC175P0C221 793 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 EIF6P56537 245 aaKnown RBP18.35■□□□□ 0.53
LITAF-201ENST00000339430 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 IDI2Q9BXS1 227 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 FAM198AQ9UFP1 575 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 SHTN1A0MZ66 631 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 KCNJ18B7U540 433 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 UBA7P41226 1012 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 COPB1P53618 953 aaKnown RBP18.35■□□□□ 0.53
LITAF-201ENST00000339430 NAPAP54920 295 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 KCNJ12Q14500 433 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 EPC1Q9H2F5 836 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 RMND1Q9NWS8 449 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 GJA3Q9Y6H8 435 aa18.35■□□□□ 0.53
LITAF-201ENST00000339430 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
LITAF-201ENST00000339430 TCP11X2Q5H9J9 407 aa18.34■□□□□ 0.53
LITAF-201ENST00000339430 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms