RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MTFR1LQ9H019 292 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 NYAP2Q9P242 653 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 MYO3BQ8WXR4 1341 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 TXKP42681 527 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 TNNI2P48788 182 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 TGFB2P61812 414 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 DPYDQ12882 1025 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 MORC3Q14149 939 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 SPDYE2Q495Y8 402 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 TMEM179Q6ZVK1 233 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 MTMR8Q96EF0 704 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 NAP1L5Q96NT1 182 aaPredicted RBP8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.07
SRFBP1-201ENST00000339397 IKQ13123 557 aaPredicted RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 GPATCH4Q5T3I0 446 aaKnown RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 GALNT17Q6IS24 598 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 SARM1Q6SZW1 724 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 NEK8Q86SG6 692 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 SGIP1Q9BQI5 828 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 SAMSN1Q9NSI8 373 aaKnown RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 PCDHA1Q9Y5I3 950 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 CENPFP49454 3210 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 ZNF500O60304 480 aaPredicted RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 NEMFO60524 1076 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 SMC2O95347 1197 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 BMP15O95972 392 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 POLD1P28340 1107 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 PTGER2P43116 358 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 ADCY7P51828 1080 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 CDC37Q16543 378 aaPredicted RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 ARL6IP4Q66PJ3 421 aaKnown RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 CCDC12Q8WUD4 166 aaPredicted RBP8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 FAM151AQ8WW52 585 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 JDP2Q8WYK2 163 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 BPIFA3Q9BQP9 254 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 PSTPIP2Q9H939 334 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 MYOZ2Q9NPC6 264 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 PGAP2Q9UHJ9 254 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 HDAC9Q9UKV0 1011 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 GJA3Q9Y6H8 435 aa8.39□□□□□ -1.07
SRFBP1-201ENST00000339397 GREB1LQ9C091 1923 aaPredicted RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 POTEMA6NI47 508 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 FANCCQ00597 558 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 GOLGA8FQ08AF8 430 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 GOLGA8DPQ0D2H9 430 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 TBC1D10BQ4KMP7 808 aaPredicted RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 KRT25Q7Z3Z0 450 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 TBC1D5Q92609 795 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 MMTAG2Q9BU76 263 aaKnown RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 RIC8AQ9NPQ8 531 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 FBXO28Q9NVF7 368 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 TMOD2Q9NZR1 351 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 HOXA13P31271 388 aaPredicted RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 LONP1P36776 959 aaKnown RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 MYL5Q02045 173 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 RASA3Q14644 834 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 DLK2Q6UY11 383 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 SLC30A10Q6XR72 485 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 IQUBQ8NA54 791 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 EEF2KMTQ96G04 330 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 ZFP91Q96JP5 570 aaPredicted RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 DISC1Q9NRI5 854 aa8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 MORC2Q9Y6X9 1032 aaPredicted RBP8.38□□□□□ -1.07
SRFBP1-201ENST00000339397 ESYT2A0FGR8 921 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 MEIS2O14770 477 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 OPLAHO14841 1288 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 OR52Z1P0C646 297 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 UBA7P41226 1012 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 FAM83BQ5T0W9 1011 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 ELOA2Q8IYF1 753 aaPredicted RBP8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 AGBL3Q8NEM8 1001 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 RASSF8Q8NHQ8 419 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 ZBED3Q96IU2 234 aaPredicted RBP8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 MTMR9Q96QG7 549 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 INTS13Q9NVM9 706 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 NFE2L3Q9Y4A8 694 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 BMP3P12645 472 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 PLCG1P19174 1290 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 STAT6P42226 847 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 ECM1Q16610 540 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 CYP2W1Q8TAV3 490 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 KIAA1524Q8TCG1 905 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 HAS1Q92839 578 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 HPS3Q969F9 1004 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 HOOK1Q9UJC3 728 aaKnown RBP8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 ZBTB21Q9ULJ3 1066 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 GDAQ9Y2T3 454 aa8.37□□□□□ -1.07
SRFBP1-201ENST00000339397 IKBKBO14920 756 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 GMPSP49915 693 aaPredicted RBP8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 NOLC1Q14978 699 aaKnown RBP eCLIP8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms