RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 ZNF365Q70YC5 407 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 PI4K2BQ8TCG2 481 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 DCAF4Q8WV16 495 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 MPHOSPH6Q99547 160 aaKnown RBP16.8■□□□□ 0.28
COMMD4-202ENST00000338995 KATNBL1Q9H079 304 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 IL23AQ9NPF7 189 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 PRR12Q9ULL5 1215 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 LAMA2P24043 3122 aaKnown RBP16.8■□□□□ 0.28
COMMD4-202ENST00000338995 ZNF536O15090 1300 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 ADCY6O43306 1168 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 CD4P01730 458 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-202ENST00000338995 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-202ENST00000338995 NSMFQ6X4W1 530 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 C16orf59Q7L2K0 433 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 VTA1Q9NP79 307 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
COMMD4-202ENST00000338995 GNEQ9Y223 722 aaKnown RBP16.79■□□□□ 0.28
COMMD4-202ENST00000338995 LOC102724159A0A0B4J2E5 919 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 ACRP10323 421 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 CYP2C18P33260 490 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 PWP2Q15269 919 aaKnown RBP16.78■□□□□ 0.28
COMMD4-202ENST00000338995 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 SLC43A3Q8NBI5 491 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 HERVK_113Q902F9 699 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-202ENST00000338995 HELLSQ9NRZ9 838 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 ANAPC4Q9UJX5 808 aa16.78■□□□□ 0.28
COMMD4-202ENST00000338995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
COMMD4-202ENST00000338995 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-202ENST00000338995 B4DLN1 442 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 CTAGE5O15320 804 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 ORC4O43929 436 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 ICAM1P05362 532 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 SMPD1P17405 629 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
COMMD4-202ENST00000338995 ALX1Q15699 326 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 RASIP1Q5U651 963 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 PBX4Q9BYU1 374 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 POLR3EQ9NVU0 708 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 PCDHB15Q9Y5E8 787 aa16.77■□□□□ 0.28
COMMD4-202ENST00000338995 TOP1P11387 765 aaKnown RBP16.76■□□□□ 0.27
COMMD4-202ENST00000338995 SNAP25P60880 206 aa16.76■□□□□ 0.27
COMMD4-202ENST00000338995 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
COMMD4-202ENST00000338995 TJAP1Q5JTD0 557 aa16.76■□□□□ 0.27
COMMD4-202ENST00000338995 SLC28A3Q9HAS3 691 aa16.76■□□□□ 0.27
COMMD4-202ENST00000338995 MYO9BQ13459 2157 aa16.76■□□□□ 0.27
COMMD4-202ENST00000338995 MCM3APO60318 1980 aa16.76■□□□□ 0.27
COMMD4-202ENST00000338995 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 NMT2O60551 498 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 CPT1AP50416 773 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 BAATQ14032 418 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-202ENST00000338995 DUSP28Q4G0W2 176 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
COMMD4-202ENST00000338995 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 TAPT1Q6NXT6 567 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-202ENST00000338995 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-202ENST00000338995 MORC4Q8TE76 937 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 TTC14Q96N46 770 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-202ENST00000338995 RANBP17Q9H2T7 1088 aaKnown RBP16.75■□□□□ 0.27
COMMD4-202ENST00000338995 INCENPQ9NQS7 918 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 PDGFCQ9NRA1 345 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
COMMD4-202ENST00000338995 ASTN1O14525 1302 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 PTPDC1A2A3K4 754 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 KPNA6O60684 536 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
COMMD4-202ENST00000338995 PBX2P40425 430 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 NOVP48745 357 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
COMMD4-202ENST00000338995 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 SLC4A7Q9Y6M7 1214 aa16.74■□□□□ 0.27
COMMD4-202ENST00000338995 RAD50Q92878 1312 aa16.73■□□□□ 0.27
COMMD4-202ENST00000338995 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
COMMD4-202ENST00000338995 FGAP02671 866 aa16.73■□□□□ 0.27
COMMD4-202ENST00000338995 PFKMP08237 780 aa16.73■□□□□ 0.27
COMMD4-202ENST00000338995 FGRP09769 529 aa16.73■□□□□ 0.27
COMMD4-202ENST00000338995 IGFBP4P22692 258 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms