RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CPLX1O14810 134 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 FOSP01100 380 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 SCNN1DP51172 638 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 ZCWPW2Q504Y3 356 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 KIAA1755Q5JYT7 1200 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 EPM2AIP1Q7L775 607 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 SPRYD3Q8NCJ5 442 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 ZC3H15Q8WU90 426 aaKnown RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 HAS1Q92839 578 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 RRP36Q96EU6 259 aaKnown RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 MYL10Q9BUA6 226 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 VCPKMTQ9H867 229 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 PVALEFA0A1B0GWK0 134 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 A0A1W2PRG0 241 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 WDR46O15213 610 aaKnown RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 GTPBP6O43824 516 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 SCP2P22307 547 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 GTF2F1P35269 517 aaKnown RBP eCLIP6.12□□□□□ -1.432e-8■■■■■ 34.1
PRPF4B-201ENST00000337659 NR5A1Q13285 461 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 NBR1Q14596 966 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 FCHSD1Q86WN1 690 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 APOBEC3FQ8IUX4 373 aaKnown RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 CLEC4DQ8WXI8 215 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 SLC5A5Q92911 643 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 TAOK3Q9H2K8 898 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 LIMA1Q9UHB6 759 aaKnown RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 KCNH3Q9ULD8 1083 aa6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 V9GY48 417 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-201ENST00000337659 APPP05067 770 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 CHAF1AQ13111 956 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 DPY19L2P1Q6NXN4 242 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 TMEM139Q8IV31 216 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PAGE5Q96GU1 130 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 ZFP91Q96JP5 570 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 POLR3CQ9BUI4 534 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 ST6GALNAC4Q9H4F1 302 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 BRMS1Q9HCU9 246 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 DISC1Q9NRI5 854 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 GJB4Q9NTQ9 266 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 HDAC9Q9UKV0 1011 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 KCNH4Q9UQ05 1017 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 C6orf229H3BNL8 230 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PMM2O15305 246 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 MAPTP10636 758 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 ZNF75DP51815 510 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 TRIM29Q14134 588 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 FIGNQ5HY92 759 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 FAM173BQ6P4H8 233 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 GIMAP8Q8ND71 665 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 DDX11Q96FC9 970 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 CSRNP2Q9H175 543 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 KCND2Q9NZV8 630 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 MAN1B1Q9UKM7 699 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 A0A1B0GTH6 734 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 RASSF10A6NK89 507 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 MINDY4BA8MYZ0 360 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 NEMFO60524 1076 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 EEF2P13639 858 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 ZNF131P52739 623 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 GRIN1Q05586 938 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 SAFBQ15424 915 aaKnown RBP eCLIP6.11□□□□□ -1.434e-6■□□□□ 10.9
PRPF4B-201ENST00000337659 LONRF3Q496Y0 759 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 CIAPIN1Q6FI81 312 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 C11orf57Q6ZUT1 292 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 FSIP1Q8NA03 581 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 TANGO6Q9C0B7 1094 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 C6orf50Q9HD87 102 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PRDM4Q9UKN5 801 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 ADGRA2Q96PE1 1338 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 GLTPD2A6NH11 291 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 FIBPO43427 364 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PSMD2Q13200 908 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 NOM1Q5C9Z4 860 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 SECISBP2LQ93073 1101 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PNMA5Q96PV4 448 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 ZKSCAN3Q9BRR0 538 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 MXD3Q9BW11 206 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 SH2D4AQ9H788 454 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 DBNDD1Q9H9R9 158 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PRDM16Q9HAZ2 1276 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 BLOC1S4Q9NUP1 217 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 GPRC5DQ9NZD1 345 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 VPS54Q9P1Q0 977 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PCDHAC2Q9Y5I4 1007 aa6.11□□□□□ -1.43
PRPF4B-201ENST00000337659 PPIP5K2O43314 1243 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 STAM2O75886 525 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 ICAM1P05362 532 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 POLR3DP05423 398 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 NCLP19338 710 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 EDNRBP24530 442 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 POSTNQ15063 836 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 NONOQ15233 471 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 DOK7Q18PE1 504 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 CERKLQ49MI3 558 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 NFXL1Q6ZNB6 911 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 NEK8Q86SG6 692 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 IQCDQ96DY2 449 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 FAM20AQ96MK3 541 aa6.1□□□□□ -1.43
PRPF4B-201ENST00000337659 SLC38A10Q9HBR0 1119 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms