RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SNHG28P0DPA3 235 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L24Q0WX57 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 RRP1BQ14684 758 aaKnown RBP26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L6PQ6QN14 398 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 CABP7Q86V35 215 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 CCDC34Q96HJ3 373 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 NKRFO15226 690 aaKnown RBP eCLIP26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 KMT5BQ4FZB7 885 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 TOGARAM2Q6ZUX3 1019 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 KRT25Q7Z3Z0 450 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 LRRN4CLQ8ND94 238 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 PRMT6Q96LA8 375 aaPredicted RBP26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 ZDHHC15Q96MV8 337 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 MMTAG2Q9BU76 263 aaKnown RBP26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 TAB2Q9NYJ8 693 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 SUGT1Q9Y2Z0 365 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 IGSF3O75054 1194 aa26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 TBX2Q13207 712 aaPredicted RBP26.07■■□□□ 1.76
CLPTM1-201ENST00000337392 A0A1B0GTH6 734 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 MYH4Q9Y623 1939 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 CLRN2A0PK11 232 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 GTF2F1P35269 517 aaKnown RBP eCLIP26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 ADCY7P51828 1080 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 CDKAL1Q5VV42 579 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 SIAH1Q8IUQ4 282 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 CDAN1Q8IWY9 1227 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 SPICE1Q8N0Z3 855 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 PLIN4Q96Q06 1357 aa26.06■■□□□ 1.76
CLPTM1-201ENST00000337392 RNF225M0QZC1 329 aaPredicted RBP26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 KLRC4O43908 158 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 RAD17O75943 681 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 FCER1AP12319 257 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 SLC15A2Q16348 729 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 GALNT17Q6IS24 598 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 CCDC12Q8WUD4 166 aaPredicted RBP26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 ZBTB12Q9Y330 459 aaPredicted RBP26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 RBL2Q08999 1139 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 CERKLQ49MI3 558 aaPredicted RBP26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 ASPRV1Q53RT3 343 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 STRIP1Q5VSL9 837 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 CCDC112Q8NEF3 446 aa26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 ADD3Q9UEY8 706 aaKnown RBP26.05■■□□□ 1.76
CLPTM1-201ENST00000337392 ERCC3P19447 782 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 PAK1Q13153 545 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 KRT31Q15323 416 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 SMCHD1A6NHR9 2005 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 PPIP5K2O43314 1243 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 ZNF658Q5TYW1 1059 aaPredicted RBP26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 POTEAQ6S8J7 498 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 FLAD1Q8NFF5 587 aa26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 RGS17Q9UGC6 210 aaPredicted RBP26.04■■□□□ 1.76
CLPTM1-201ENST00000337392 SOWAHDA6NJG2 315 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 BAG1Q99933 345 aaPredicted RBP26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 SIPA1L1O43166 1804 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 TCP10L2B9ZVM9 353 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 DEFB132Q7Z7B7 95 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 IGSF22Q8N9C0 903 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 C7orf43Q8WVR3 580 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 SWAP70Q9UH65 585 aa26.03■■□□□ 1.76
CLPTM1-201ENST00000337392 SAMD1Q6SPF0 538 aaPredicted RBP26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 PES1O00541 588 aaKnown RBP26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 SLC1A4P43007 532 aa26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 CALCRLQ16602 461 aa26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 USH1GQ495M9 461 aa26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 KBTBD4Q9NVX7 518 aa26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 ZNF215Q9UL58 517 aaPredicted RBP26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
CLPTM1-201ENST00000337392 STK4Q13043 487 aa26.01■■□□□ 1.76
CLPTM1-201ENST00000337392 DYMQ7RTS9 669 aa26.01■■□□□ 1.76
CLPTM1-201ENST00000337392 KCNK18Q7Z418 384 aa26.01■■□□□ 1.76
CLPTM1-201ENST00000337392 P2RX7Q99572 595 aaKnown RBP26.01■■□□□ 1.76
CLPTM1-201ENST00000337392 PNMA6FA0A0J9YX94 578 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 CASP14P31944 242 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 FXR1P51114 621 aaKnown RBP eCLIP26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 IRF2BP1Q8IU81 584 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 IRX2Q9BZI1 471 aaPredicted RBP26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 NT5C2P49902 561 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 ECM1Q16610 540 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 QRICH1Q2TAL8 776 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 CCSER1Q9C0I3 900 aa26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 ZNF277Q9NRM2 450 aaPredicted RBP26.01■■□□□ 1.75
CLPTM1-201ENST00000337392 NCBP1Q09161 790 aaKnown RBP26■■□□□ 1.75
CLPTM1-201ENST00000337392 REXO1L1PQ8IX06 675 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 DNAI1Q9UI46 699 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 N4BP3O15049 544 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 ASIC1P78348 528 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 MCM6Q14566 821 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 TRIM34Q9BYJ4 488 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 PI4KBQ9UBF8 816 aa26■■□□□ 1.75
CLPTM1-201ENST00000337392 ZBTB5O15062 677 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 GH2P01242 217 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 ICA1Q05084 483 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 SLFN13Q68D06 897 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 GLIS3Q8NEA6 775 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 MTMR9Q96QG7 549 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 TRIM9Q9C026 710 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 KCNJ18B7U540 433 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 IKQ13123 557 aaPredicted RBP25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 GRB10Q13322 594 aa25.99■■□□□ 1.75
CLPTM1-201ENST00000337392 KCNJ12Q14500 433 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms