RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PRR29P0C7W0 189 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 NEFHP12036 1026 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 TRIM28Q13263 835 aaKnown RBP7.2□□□□□ -1.26
HMG20A-201ENST00000336216 SHC4Q6S5L8 630 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.262e-7■□□□□ 9.4
HMG20A-201ENST00000336216 TXNRD3Q86VQ6 643 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 FAM76AQ8TAV0 307 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 TBCKQ8TEA7 893 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 IFT81Q8WYA0 676 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 SERPINB13Q9UIV8 391 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 MAN1B1Q9UKM7 699 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 MEGF6O75095 1541 aa7.2□□□□□ -1.26
HMG20A-201ENST00000336216 FAM208AQ9UK61 1670 aaKnown RBP7.2□□□□□ -1.26
HMG20A-201ENST00000336216 GOLGA6CA6NDK9 693 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CCDC169A6NNP5 214 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 EIF3CLB5ME19 914 aaKnown RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 C21orf2O43822 256 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 GOLGA6DP0CG33 693 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 ATP2B4P23634 1241 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 LIFRP42702 1097 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CDR1P51861 262 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 ANTXR2P58335 489 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 VSNL1P62760 191 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 EXOSC10Q01780 885 aaKnown RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 KCTD16Q68DU8 428 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 TYW1BQ6NUM6 668 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 SRLQ86TD4 932 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CEP57Q86XR8 500 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 TBC1D22AQ8WUA7 517 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 EIF3CQ99613 913 aaKnown RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 RNF26Q9BY78 433 aaPredicted RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 GOLGA6AQ9NYA3 693 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 NARFQ9UHQ1 456 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 MROH7-TTC4A0A0A0MT08 1334 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 COL15A1P39059 1388 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 COL5A2P05997 1499 aaPredicted RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 A0A0U1RQJ8 604 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 KRT86O43790 486 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 HOXA13P31271 388 aaPredicted RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 ICA1Q05084 483 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 RRAGAQ7L523 313 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CNGA4Q8IV77 575 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 LINC00116Q8NCU8 138 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 GIMAP7Q8NHV1 300 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 PPM1EQ8WY54 764 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CSRNP1Q96S65 589 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 HDAC6Q9UBN7 1215 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 GDAQ9Y2T3 454 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 MRFAP1Q9Y605 127 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 AFF2P51816 1311 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 PPEF1O14829 653 aaPredicted RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 ALDH1B1P30837 517 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CDK8P49336 464 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 GRIN1Q05586 938 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 FMR1Q06787 632 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 SLFN13Q68D06 897 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 HS2ST1Q7LGA3 356 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 KRT25Q7Z3Z0 450 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 MAATS1Q7Z4T9 603 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 NEK8Q86SG6 692 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 NLGN1Q8N2Q7 840 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 BCAS4Q8TDM0 211 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 ALS2CR12Q96Q35 445 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 TDRD3Q9H7E2 651 aaKnown RBP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMG20A-201ENST00000336216 CD209Q9NNX6 404 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 MYO6Q9UM54 1294 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 TFR2Q9UP52 801 aa7.19□□□□□ -1.26
HMG20A-201ENST00000336216 LOC102724159A0A0B4J2E5 919 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 NDUFAB1O14561 156 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 ERLIN2O94905 339 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 CAMTA2O94983 1202 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 ALAS1P13196 640 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 CETN1Q12798 172 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 PABPC4Q13310 644 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 PWP2Q15269 919 aaKnown RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 TRIM65Q6PJ69 517 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 CLEC4GQ6UXB4 293 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 FUT8Q9BYC5 575 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 KANSL2Q9H9L4 492 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 EPB41L4AQ9HCS5 686 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 BICDL2A1A5D9 508 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 KCNJ18B7U540 433 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 GCNT3O95395 438 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 CSF1RP07333 972 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 MAP3K9P80192 1104 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 GRAPQ13588 217 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 KCNJ12Q14500 433 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 NCAPHQ15003 741 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 ILDR1Q86SU0 546 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 METTL16Q86W50 562 aaKnown RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 MYCT1Q8N699 235 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 OTUD6BQ8N6M0 293 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 GRAPLQ8TC17 118 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 PNKPQ96T60 521 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 FOXP1Q9H334 677 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 KIAA1024Q9UPX6 916 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 LEMD3Q9Y2U8 911 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 PXDNLA1KZ92 1463 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms