RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ARHGAP39Q9C0H5 1083 aa16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 PCDHA1Q9Y5I3 950 aa16.27■□□□□ 0.2
APOBEC3B-202ENST00000335760 SMCHD1A6NHR9 2005 aa16.27■□□□□ 0.19
APOBEC3B-202ENST00000335760 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 CTGFP29279 349 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 FCGRTP55899 365 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 TRAF1Q13077 416 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 MUM1L1Q5H9M0 696 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 PLEKHH3Q7Z736 793 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 ERO1AQ96HE7 468 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 ACAD9Q9H845 621 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 MGAMO43451 1857 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 JAK2O60674 1132 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 DEXIO95424 95 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 SCG2P13521 617 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 LBX1P52954 281 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 PKN1Q16512 942 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 CLEC4DQ8WXI8 215 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 MMP19Q99542 508 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 ORC3Q9UBD5 711 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 FBXO40Q9UH90 709 aa16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 MRPL11Q9Y3B7 192 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-202ENST00000335760 CAP1Q01518 475 aa16.25■□□□□ 0.19
APOBEC3B-202ENST00000335760 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
APOBEC3B-202ENST00000335760 PLXNB2O15031 1838 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 STXBP3O00186 592 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 NFIBO00712 420 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 FCER1AP12319 257 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 PTPREP23469 700 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 NAPAP54920 295 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 CUL4AQ13619 759 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 BARHL2Q9NY43 387 aa16.24■□□□□ 0.19
APOBEC3B-202ENST00000335760 SLC15A5A6NIM6 579 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 hCG_1984214I3L0E3 225 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 STRNO43815 780 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 KCTD2Q14681 263 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 NSMFQ6X4W1 530 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 MCF2L2Q86YR7 1114 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 ANKRD35Q8N283 1001 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 ZNF713Q8N859 430 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 WASF1Q92558 559 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3B-202ENST00000335760 OPLAHO14841 1288 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 GRB14Q14449 540 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 TYW1BQ6NUM6 668 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 PPP1R18Q6NYC8 613 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 ABRAQ8N0Z2 381 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 RGS22Q8NE09 1264 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 ALG1Q9BT22 464 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 A1CFQ9NQ94 594 aaKnown RBP16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
APOBEC3B-202ENST00000335760 CFBP00751 764 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 PGK2P07205 417 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 HOXD10P28358 340 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 ADORA2AP29274 412 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 MORN1Q5T089 497 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 NUDT12Q9BQG2 462 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 CYP39A1Q9NYL5 469 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 SMC3Q9UQE7 1217 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 TRIM17Q9Y577 477 aa16.21■□□□□ 0.19
APOBEC3B-202ENST00000335760 RBBP6Q7Z6E9 1792 aaKnown RBP16.21■□□□□ 0.18
APOBEC3B-202ENST00000335760 PFASO15067 1338 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 ZNFX1Q9P2E3 1918 aaKnown RBP16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 GNRH1P01148 92 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 CALML3P27482 149 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 FOSBP53539 338 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 OTOP1Q7RTM1 612 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 DPP9Q86TI2 863 aa16.2■□□□□ 0.18
APOBEC3B-202ENST00000335760 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms