RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 CEP95Q96GE4 821 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 ERLIN2O94905 339 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 STAT6P42226 847 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 DDR1Q08345 913 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 RBL2Q08999 1139 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 NR1I3Q14994 352 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 LETM2Q2VYF4 491 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 SPATA1Q5VX52 437 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 HINFPQ9BQA5 517 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 AFF2P51816 1311 aa15.56■□□□□ 0.08
SF1-202ENST00000334944 LRRIQ3A6PVS8 624 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 HNRNPH1P31943 449 aaKnown RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 CCT5P48643 541 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 SCNN1DP51172 638 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 TBX2Q13207 712 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 CASP8Q14790 479 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 APTXQ7Z2E3 356 aaKnown RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 LRRC47Q8N1G4 583 aaKnown RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 C4orf32Q8N8J7 132 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 IGSF22Q8N9C0 903 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 KIFC2Q96AC6 838 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 MRPL44Q9H9J2 332 aaKnown RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 TAB2Q9NYJ8 693 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 FLT1P17948 1338 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 CCDC88AQ3V6T2 1871 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 PES1O00541 588 aaKnown RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 ZSCAN12O43309 604 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 NAPAP54920 295 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 GSCP56915 257 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 GSTO1P78417 241 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 TTC19Q6DKK2 380 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 KCNV1Q6PIU1 500 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 SUGP1Q8IWZ8 645 aaKnown RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 EFCAB13Q8IY85 973 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 ELOA2Q8IYF1 753 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 JPH2Q9BR39 696 aaPredicted RBP15.55■□□□□ 0.08
SF1-202ENST00000334944 L1RE1Q9UN81 338 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 KIAA1551Q9HCM1 1747 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 SRCAPQ6ZRS2 3230 aa15.55■□□□□ 0.08
SF1-202ENST00000334944 USP17L5A8MUK1 530 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 STXBP3O00186 592 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 RAD21O60216 631 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 BMP15O95972 392 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 ERCC5P28715 1186 aaPredicted RBP15.54■□□□□ 0.08
SF1-202ENST00000334944 DOK7Q18PE1 504 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 TBC1D16Q8TBP0 767 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 LRRC15Q8TF66 581 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 GSDMAQ96QA5 445 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 CCP110O43303 1012 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 CALML3P27482 149 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 BRD3Q15059 726 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 PPP2R5AQ15172 486 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 PIGSQ96S52 555 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 TMEM260Q9NX78 707 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 BIN2Q9UBW5 565 aaPredicted RBP15.54■□□□□ 0.08
SF1-202ENST00000334944 A0A1B0GTH6 734 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 EIF3JO75822 258 aaKnown RBP15.54■□□□□ 0.08
SF1-202ENST00000334944 LDHCP07864 332 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 DTHD1Q6ZMT9 781 aa15.54■□□□□ 0.08
SF1-202ENST00000334944 RNF40O75150 1001 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 PPFIA4O75335 1185 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 CASP14P31944 242 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 RHBDL3P58872 404 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 A0A087WUV0 522 aaPredicted RBP15.53■□□□□ 0.08
SF1-202ENST00000334944 RNF225M0QZC1 329 aaPredicted RBP15.53■□□□□ 0.08
SF1-202ENST00000334944 ARHGAP6O43182 974 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 CCNT1O60563 726 aaKnown RBP15.53■□□□□ 0.08
SF1-202ENST00000334944 RPN1P04843 607 aaKnown RBP15.53■□□□□ 0.08
SF1-202ENST00000334944 PRCPP42785 496 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 PMS1P54277 932 aaKnown RBP15.53■□□□□ 0.08
SF1-202ENST00000334944 NAALADL2Q58DX5 795 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 NELFBQ8WX92 580 aa15.53■□□□□ 0.08
SF1-202ENST00000334944 PALM3A6NDB9 673 aaPredicted RBP15.52■□□□□ 0.08
SF1-202ENST00000334944 SMCO2A6NFE2 343 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 N4BP3O15049 544 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 TUBB4AP04350 444 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 UBA7P41226 1012 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 KCNJ6P48051 423 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 PPP4CP60510 307 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 SWT1Q5T5J6 900 aaKnown RBP15.52■□□□□ 0.08
SF1-202ENST00000334944 HPS3Q969F9 1004 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 COA7Q96BR5 231 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 BARHL2Q9NY43 387 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.08
SF1-202ENST00000334944 ADD3Q9UEY8 706 aaKnown RBP15.52■□□□□ 0.08
SF1-202ENST00000334944 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.08
SF1-202ENST00000334944 FXR1P51114 621 aaKnown RBP eCLIP15.52■□□□□ 0.08
SF1-202ENST00000334944 KRT31Q15323 416 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 PPFIBP1Q86W92 1011 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
SF1-202ENST00000334944 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.08
SF1-202ENST00000334944 COL24A1Q17RW2 1714 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 GPR75-ASB3A0A0A6YYF3 556 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 TRAPPC10P48553 1259 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 RAD9BQ6WBX8 426 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 GJA10Q969M2 543 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 POLD4Q9HCU8 107 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms