RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NT5C2P49902 561 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 DCUN1D2Q6PH85 259 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 CDHR1Q96JP9 859 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 SEPT9Q9UHD8 586 aaPredicted RBP16.61■□□□□ 0.25
C9orf47-201ENST00000334490 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 ZNF445P59923 1031 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
C9orf47-201ENST00000334490 STAG1Q8WVM7 1258 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 CTTNBP2NLQ9P2B4 639 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
C9orf47-201ENST00000334490 SLU7O95391 586 aaKnown RBP16.61■□□□□ 0.25
C9orf47-201ENST00000334490 MMP1P03956 469 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 SNAP25P60880 206 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 SEPT2Q15019 361 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 GOLGA5Q8TBA6 731 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 AGTPBP1Q9UPW5 1226 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 PNMA6FA0A0J9YX94 578 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 UBE2SQ16763 222 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 PPP1R14CQ8TAE6 165 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 CCDC127Q96BQ5 260 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 ARFGAP3Q9NP61 516 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 CD163L1Q9NR16 1453 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 AIFM3Q96NN9 605 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 P4HA1P13674 534 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 RABL6Q3YEC7 729 aaPredicted RBP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 TBC1D10CQ8IV04 446 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 GJA10Q969M2 543 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 CCDC114Q96M63 670 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 NACA2Q9H009 215 aa16.6■□□□□ 0.25
C9orf47-201ENST00000334490 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 V9GYY5 206 aaPredicted RBP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
C9orf47-201ENST00000334490 RPN1P04843 607 aaKnown RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 HOXA13P31271 388 aaPredicted RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 RRAGAQ7L523 313 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 LARP4BQ92615 738 aaKnown RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 PLEKHA8P1O95397 391 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 YARSP54577 528 aaKnown RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 TNNC1P63316 161 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 SCARF1Q14162 830 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 SFMBT2Q5VUG0 894 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 IQCGQ9H095 443 aaKnown RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 UTYO14607 1347 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 DLATP10515 647 aaKnown RBP16.59■□□□□ 0.25
C9orf47-201ENST00000334490 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
C9orf47-201ENST00000334490 RIMS1Q86UR5 1692 aaKnown RBP16.58■□□□□ 0.25
C9orf47-201ENST00000334490 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.25
C9orf47-201ENST00000334490 ERICH4A6NGS2 130 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 LARGE1O95461 756 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 ADAM9Q13443 819 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 MORC3Q14149 939 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 MCM6Q14566 821 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 ATG9AQ7Z3C6 839 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 AK8Q96MA6 479 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 A0A1W2PQ27 194 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 A0A1W2PQ64 194 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 A0A1W2PQD8 194 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 KCNJ18B7U540 433 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 CCND2P30279 289 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 SPP2Q13103 211 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 KCNJ12Q14500 433 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 JAKMIP2Q96AA8 810 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 POLR3EQ9NVU0 708 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 ANKFY1Q9P2R3 1169 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 PALM3A6NDB9 673 aaPredicted RBP16.58■□□□□ 0.24
C9orf47-201ENST00000334490 CDC25AP30304 524 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 CALCOCO2Q13137 446 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 FAM83BQ5T0W9 1011 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 XPO4Q9C0E2 1151 aaKnown RBP16.58■□□□□ 0.24
C9orf47-201ENST00000334490 ST7Q9NRC1 585 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 PCDHA5Q9Y5H7 936 aa16.58■□□□□ 0.24
C9orf47-201ENST00000334490 TECPR2O15040 1411 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 DAPK3O43293 454 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 CUL4AQ13619 759 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 BMS1Q14692 1282 aaKnown RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 IFT81Q8WYA0 676 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 HNRNPDLO14979 420 aaKnown RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 LPXNO60711 386 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 PPP6R2O75170 966 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 CCDC25Q86WR0 208 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms