RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 AKAP17AQ02040 695 aaKnown RBP19.04■□□□□ 0.64
SHOX-201ENST00000334060 USP17L6PQ6QN14 398 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 CLEC4DQ8WXI8 215 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 HOXC10Q9NYD6 342 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 OSBPP22059 807 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 CTGFP29279 349 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 NAPAP54920 295 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 HMGN5P82970 282 aaKnown RBP19.04■□□□□ 0.64
SHOX-201ENST00000334060 C8orf76Q96K31 380 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 MOV10L1Q9BXT6 1211 aaKnown RBP19.04■□□□□ 0.64
SHOX-201ENST00000334060 EFCC1Q9HA90 598 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 MTMR6Q9Y217 621 aa19.04■□□□□ 0.64
SHOX-201ENST00000334060 WNT7AO00755 349 aa19.03■□□□□ 0.64
SHOX-201ENST00000334060 PHF20Q9BVI0 1012 aa19.03■□□□□ 0.64
SHOX-201ENST00000334060 AMNQ9BXJ7 453 aa19.03■□□□□ 0.64
SHOX-201ENST00000334060 BTBD18B2RXH4 712 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 ZBED4O75132 1171 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 TRPA1O75762 1119 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 FBXO18Q8NFZ0 1043 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 SPATC1LQ9H0A9 340 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 COL20A1Q9P218 1284 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 THSD7BQ9C0I4 1608 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 STAT3P40763 770 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 SLC30A10Q6XR72 485 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 ZFP91Q96JP5 570 aaPredicted RBP19.02■□□□□ 0.64
SHOX-201ENST00000334060 ARHGAP39Q9C0H5 1083 aa19.02■□□□□ 0.64
SHOX-201ENST00000334060 SMCO2A6NFE2 343 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 ERCC3P19447 782 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 ERVK-9P63128 1117 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 ERVK-24P63145 666 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 SREBF2Q12772 1141 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 UBE2Q2Q8WVN8 375 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 RNF146Q9NTX7 359 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 BIN2Q9UBW5 565 aaPredicted RBP19.01■□□□□ 0.63
SHOX-201ENST00000334060 MYPNQ86TC9 1320 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 STX6O43752 255 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 MMP1P03956 469 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 PARK7Q99497 189 aaKnown RBP19.01■□□□□ 0.63
SHOX-201ENST00000334060 RNF186Q9NXI6 227 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 DAXXQ9UER7 740 aaPredicted RBP19.01■□□□□ 0.63
SHOX-201ENST00000334060 SLC45A1Q9Y2W3 748 aa19.01■□□□□ 0.63
SHOX-201ENST00000334060 MEIS2O14770 477 aa19■□□□□ 0.63
SHOX-201ENST00000334060 BCRP11274 1271 aa19■□□□□ 0.63
SHOX-201ENST00000334060 NLRP5P59047 1200 aa19■□□□□ 0.63
SHOX-201ENST00000334060 NCAPG2Q86XI2 1143 aa19■□□□□ 0.63
SHOX-201ENST00000334060 TEX13BQ9BXU2 312 aa19■□□□□ 0.63
SHOX-201ENST00000334060 LCTP09848 1927 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 CFBP00751 764 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 UBXN2AP68543 259 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 PABPC4Q13310 644 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHOX-201ENST00000334060 JAKMIP3Q5VZ66 844 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 C17orf99Q6UX52 265 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 DIS3L2Q8IYB7 885 aaKnown RBP18.99■□□□□ 0.63
SHOX-201ENST00000334060 FTOQ9C0B1 505 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHOX-201ENST00000334060 PNMA3Q9UL41 463 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 CTDP1Q9Y5B0 961 aaPredicted RBP18.99■□□□□ 0.63
SHOX-201ENST00000334060 ASTN1O14525 1302 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 M0R2N6 131 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 EDIL3O43854 480 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 TLR2O60603 784 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 WDR78Q5VTH9 848 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 MCTP1Q6DN14 999 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 NSMFQ6X4W1 530 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 TNFRSF25Q93038 417 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 ZMYND12Q9H0C1 365 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 RABGAP1Q9Y3P9 1069 aa18.99■□□□□ 0.63
SHOX-201ENST00000334060 ATP2A1O14983 1001 aa18.98■□□□□ 0.63
SHOX-201ENST00000334060 PGK2P07205 417 aa18.98■□□□□ 0.63
SHOX-201ENST00000334060 A1CFQ9NQ94 594 aaKnown RBP18.98■□□□□ 0.63
SHOX-201ENST00000334060 PCDHA6Q9UN73 950 aa18.98■□□□□ 0.63
SHOX-201ENST00000334060 PCDHA8Q9Y5H6 950 aa18.98■□□□□ 0.63
SHOX-201ENST00000334060 CA12O43570 354 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 INHBEP58166 350 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 RIOX2Q8IUF8 465 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 PSTPIP2Q9H939 334 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 H3BQV1 296 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 BRD1O95696 1058 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 CNTN2Q02246 1040 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 RESTQ13127 1097 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 IFFO2Q5TF58 517 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 FCHSD1Q86WN1 690 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 GPRC5AQ8NFJ5 357 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 MORF4L1Q9UBU8 362 aa18.97■□□□□ 0.63
SHOX-201ENST00000334060 CLK2P49760 499 aaKnown RBP18.96■□□□□ 0.63
SHOX-201ENST00000334060 ADCY7P51828 1080 aa18.96■□□□□ 0.63
SHOX-201ENST00000334060 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
SHOX-201ENST00000334060 BAATQ14032 418 aaPredicted RBP18.96■□□□□ 0.63
SHOX-201ENST00000334060 UIMC1Q96RL1 719 aa18.96■□□□□ 0.63
SHOX-201ENST00000334060 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
SHOX-201ENST00000334060 DOCK3Q8IZD9 2030 aa18.96■□□□□ 0.63
SHOX-201ENST00000334060 CALML3P27482 149 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 MAP2K2P36507 400 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 BLIDQ8IZY5 108 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 IL31RAQ8NI17 732 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 WASF1Q92558 559 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 CWC22Q9HCG8 908 aaKnown RBP18.95■□□□□ 0.62
SHOX-201ENST00000334060 RIC8AQ9NPQ8 531 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms