RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TRIM5Q9C035 493 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 DDX4Q9NQI0 724 aaKnown RBP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 HOOK1Q9UJC3 728 aaKnown RBP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 MTMR7Q9Y216 660 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 KLRF2D3W0D1 207 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 ZNF500O60304 480 aaPredicted RBP9.94□□□□□ -0.82
LSAMP-201ENST00000333617 ECE2O60344 883 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 TPM3P06753 285 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 PARP1P09874 1014 aaKnown RBP9.94□□□□□ -0.82
LSAMP-201ENST00000333617 CRKP46108 304 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 TRAPPC10P48553 1259 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 ZNF75DP51815 510 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 GRIN1Q05586 938 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 GABPAQ06546 454 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 LONRF3Q496Y0 759 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 STRIP1Q5VSL9 837 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 CDC42EP5Q6NZY7 148 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 KRBA2Q6ZNG9 492 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.94□□□□□ -0.82
LSAMP-201ENST00000333617 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 DHX40Q8IX18 779 aaKnown RBP9.94□□□□□ -0.82
LSAMP-201ENST00000333617 ELOA2Q8IYF1 753 aaPredicted RBP9.94□□□□□ -0.82
LSAMP-201ENST00000333617 BLIDQ8IZY5 108 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 CCDC148Q8NFR7 591 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 GPKOWQ92917 476 aaPredicted RBP eCLIP9.94□□□□□ -0.82
LSAMP-201ENST00000333617 CEP95Q96GE4 821 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 SWAP70Q9UH65 585 aa9.94□□□□□ -0.82
LSAMP-201ENST00000333617 BIN1O00499 593 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 POLR2DO15514 142 aaKnown RBP9.93□□□□□ -0.82
LSAMP-201ENST00000333617 CYTH3O43739 400 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 HLA-DOAP06340 250 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 VEGFAP15692 232 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-201ENST00000333617 NOVP48745 357 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 KIAA2012Q0VF49 1180 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 DPCR1Q3MIW9 517 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 SPECC1Q5M775 1068 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 GALNT17Q6IS24 598 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 APOBEC3HQ6NTF7 200 aaKnown RBP9.93□□□□□ -0.82
LSAMP-201ENST00000333617 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 RETREG3Q86VR2 466 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-201ENST00000333617 AOPEPQ8N6M6 819 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 SPC24Q8NBT2 197 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 FERMT2Q96AC1 680 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 ZDHHC15Q96MV8 337 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 MRIQ9BWK5 157 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 SPZ1Q9BXG8 430 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 OSBPL5Q9H0X9 879 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-201ENST00000333617 CSRNP2Q9H175 543 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 KCNQ5Q9NR82 932 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 SERPINB13Q9UIV8 391 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 TUBE1Q9UJT0 475 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 PCDHA4Q9UN74 947 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 MYO3BQ8WXR4 1341 aa9.93□□□□□ -0.82
LSAMP-201ENST00000333617 GOLGA8HP0CJ92 632 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 JUNDP17535 347 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 SMARCA1P28370 1054 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 CDC25BP30305 580 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 HDLBPQ00341 1268 aaKnown RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 PNOCQ13519 176 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 ZNF174Q15697 407 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 SLC35G1Q2M3R5 365 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 NOM1Q5C9Z4 860 aaKnown RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 WWC2Q6AWC2 1192 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 CC2D2BQ6DHV5 1058 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 KANK3Q6NY19 840 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 PIK3AP1Q6ZUJ8 805 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 METTL16Q86W50 562 aaKnown RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 KIAA0825Q8IV33 1275 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 SUPT20HQ8NEM7 779 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 C7orf43Q8WVR3 580 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 SYMPKQ92797 1274 aaKnown RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 BARHL2Q9NY43 387 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 C10orf71Q711Q0 1435 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 STXBP3O00186 592 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 TRIM66O15016 1216 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 AKR1B1P15121 316 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 TPM4P67936 248 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 ATP2C1P98194 919 aaPredicted RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 TRIM32Q13049 653 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 AOC3Q16853 763 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 HEATR3Q7Z4Q2 680 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 CYP4X1Q8N118 509 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 DAGLBQ8NCG7 672 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 CCDC12Q8WUD4 166 aaPredicted RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 RRP36Q96EU6 259 aaKnown RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 CCDC34Q96HJ3 373 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 ZNF830Q96NB3 372 aaPredicted RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 TTC12Q9H892 705 aaPredicted RBP9.92□□□□□ -0.82
LSAMP-201ENST00000333617 MTMR4Q9NYA4 1195 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
LSAMP-201ENST00000333617 BRCA1P38398 1863 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms