RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 STRNO43815 780 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 NMT2O60551 498 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 FGAP02671 866 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 TPM3P06753 285 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 CAPN2P17655 700 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 ALX1Q15699 326 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 MFSD14CQ5VZR4 134 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 RASGRP2Q7LDG7 609 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 DPP9Q86TI2 863 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 RIOX2Q8IUF8 465 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 ANKLE1Q8NAG6 615 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 DPF3Q92784 378 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 PAWRQ96IZ0 340 aaKnown RBP12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 SCAND2PQ9GZW5 306 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 OGDHLQ9ULD0 1010 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 STX8Q9UNK0 236 aa12.81□□□□□ -0.36
APOBEC3B-201ENST00000333467 RANBP2P49792 3224 aaKnown RBP12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 ORC4O43929 436 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 COBLO75128 1261 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLC25A27O95847 323 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 CYP2C19P33261 490 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 HAND2P61296 217 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 ABRAQ8N0Z2 381 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 KIFC2Q96AC6 838 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 TEX13BQ9BXU2 312 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 IL17RBQ9NRM6 502 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 TOMM22Q9NS69 142 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 KIF3AQ9Y496 699 aa12.8□□□□□ -0.36
APOBEC3B-201ENST00000333467 H0YGN5 161 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 GADD45BO75293 160 aaPredicted RBP12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 IGHA2P01877 340 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 FCER1AP12319 257 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 BMP3P12645 472 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 CYBAP13498 195 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 COPB2P35606 906 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 STAT3P40763 770 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 ME3Q16798 604 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 RRP12Q5JTH9 1297 aaKnown RBP12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 OLFML2BQ68BL8 750 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLFN13Q68D06 897 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 SNRNP48Q6IEG0 339 aaKnown RBP12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 NECAB2Q7Z6G3 386 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 PRPF38AQ8NAV1 312 aaKnown RBP12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 MMP19Q99542 508 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 CNPY2Q9Y2B0 182 aa12.79□□□□□ -0.36
APOBEC3B-201ENST00000333467 NEDD4P46934 1319 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 FGRP09769 529 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 GMCL1Q96IK5 515 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 LLPHQ9BRT6 129 aaKnown RBP12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 PFASO15067 1338 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 CAVIN2O95810 425 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 PGK2P07205 417 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 CNGA1P29973 690 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLC1A4P43007 532 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 STAT2P52630 851 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 KCTD2Q14681 263 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 C11orf49Q9H6J7 331 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLC38A10Q9HBR0 1119 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 RIPK3Q9Y572 518 aa12.78□□□□□ -0.36
APOBEC3B-201ENST00000333467 TMEM232C9JQI7 657 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 ATP2A1O14983 1001 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 ZBED4O75132 1171 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 LARGE1O95461 756 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 NOVP48745 357 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 ATL3Q6DD88 541 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 KCTD1Q719H9 257 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 STAG1Q8WVM7 1258 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 NEK1Q96PY6 1258 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 MTMR7Q9Y216 660 aa12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
APOBEC3B-201ENST00000333467 EVI5O60447 810 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 MSCO60682 206 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 CCDC192P0DO97 292 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 MFSD6Q6ZSS7 791 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 RGS22Q8NE09 1264 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms