RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 V9GYY5 206 aaPredicted RBP12.08□□□□□ -0.48
CCDC172-201ENST00000333254 ABCB11O95342 1321 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 SLC26A4O43511 780 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 GYS1P13807 737 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 CCNE1P24864 410 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 DNM2P50570 870 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 GABPAQ06546 454 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 FIGNQ5HY92 759 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 CABP7Q86V35 215 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 CCDC24Q8N4L8 307 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 CEP112Q8N8E3 955 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 RASGRP4Q8TDF6 673 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 STAMQ92783 540 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 DNAJC7Q99615 494 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 ARID3AQ99856 593 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 NUP58Q9BVL2 599 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 ZNF446Q9NWS9 450 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 JAG2Q9Y219 1238 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 GDAQ9Y2T3 454 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 ZNF646O15015 1829 aaPredicted RBP12.07□□□□□ -0.48
CCDC172-201ENST00000333254 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
CCDC172-201ENST00000333254 SMCO2A6NFE2 343 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 KIF20AO95235 890 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SERPINB2P05120 415 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC172-201ENST00000333254 PIP4K2BP78356 416 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 MTF1Q14872 753 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 REXO1Q8N1G1 1221 aaKnown RBP12.06□□□□□ -0.48
CCDC172-201ENST00000333254 MB21D1Q8N884 522 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 TBC1D16Q8TBP0 767 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 GOLGA1Q92805 767 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
CCDC172-201ENST00000333254 DESI2Q9BSY9 194 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SWAP70Q9UH65 585 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 CDC23Q9UJX2 597 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
CCDC172-201ENST00000333254 TUBBP07437 444 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SRGNP10124 158 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 CCT6AP40227 531 aaKnown RBP12.06□□□□□ -0.48
CCDC172-201ENST00000333254 ERVK-24P63145 666 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 CDK17Q00537 523 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 MEA1Q16626 185 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SP8Q8IXZ3 490 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
CCDC172-201ENST00000333254 OR8K1Q8NGG5 319 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 CEP95Q96GE4 821 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 COA1Q9GZY4 146 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 TAB2Q9NYJ8 693 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 PRDM4Q9UKN5 801 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 CAPN11Q9UMQ6 739 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 FHOD1Q9Y613 1164 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 SIPA1L1O43166 1804 aa12.06□□□□□ -0.48
CCDC172-201ENST00000333254 PVALEFA0A1B0GWK0 134 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 PNMA6AP0CW24 399 aaPredicted RBP12.05□□□□□ -0.48
CCDC172-201ENST00000333254 PDHBP11177 359 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 PLCG1P19174 1290 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 KRT9P35527 623 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 UBXN1Q04323 297 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 PDIA5Q14554 519 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 BRD3Q15059 726 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
CCDC172-201ENST00000333254 P2RX5Q93086 422 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 CALML4Q96GE6 196 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 MTMR9Q96QG7 549 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 NUP88Q99567 741 aaPredicted RBP12.05□□□□□ -0.48
CCDC172-201ENST00000333254 TTYH3Q9C0H2 523 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 LRRC27Q9C0I9 530 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 VPS16Q9H269 839 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 MTMR4Q9NYA4 1195 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
CCDC172-201ENST00000333254 SAP30BPQ9UHR5 308 aaKnown RBP12.05□□□□□ -0.48
CCDC172-201ENST00000333254 DAGLAQ9Y4D2 1042 aa12.05□□□□□ -0.48
CCDC172-201ENST00000333254 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 CTAGE9A4FU28 777 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 CCDC151A5D8V7 595 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 WHAMMP3Q1A5X7 153 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 MSANTD4Q8NCY6 345 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 RASSF8Q8NHQ8 419 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 HNRNPLLQ8WVV9 542 aaKnown RBP12.04□□□□□ -0.48
CCDC172-201ENST00000333254 TRIM47Q96LD4 638 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 ERGIC2Q96RQ1 377 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
CCDC172-201ENST00000333254 DUSP9Q99956 384 aaKnown RBP12.04□□□□□ -0.48
CCDC172-201ENST00000333254 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 UBXN6Q9BZV1 441 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
CCDC172-201ENST00000333254 PP2D1A8MPX8 630 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms