RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FKBP1AP62942 108 aaKnown RBP19.6■□□□□ 0.73
DDX28-201ENST00000332395 ATP2B2Q01814 1243 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 DACT2Q5SW24 774 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 CCDC17Q96LX7 622 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 MAGEF1Q9HAY2 307 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 MAPK8IP1Q9UQF2 711 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 SLX4Q8IY92 1834 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 TUBB4AP04350 444 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 TECP42680 631 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 TCP10Q12799 353 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 KMT5BQ4FZB7 885 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
DDX28-201ENST00000332395 TTBK2Q6IQ55 1244 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 PPP1R18Q6NYC8 613 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 SIPA1L1O43166 1804 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 KLRC4O43908 158 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 RBM5P52756 815 aaKnown RBP eCLIP19.59■□□□□ 0.73
DDX28-201ENST00000332395 CCDC96Q2M329 555 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 IGSF22Q8N9C0 903 aa19.59■□□□□ 0.73
DDX28-201ENST00000332395 DHX36Q9H2U1 1008 aaKnown RBP19.59■□□□□ 0.73
DDX28-201ENST00000332395 ZNF219Q9P2Y4 722 aaPredicted RBP19.59■□□□□ 0.73
DDX28-201ENST00000332395 LIMA1Q9UHB6 759 aaKnown RBP19.59■□□□□ 0.73
DDX28-201ENST00000332395 ZNF646O15015 1829 aaPredicted RBP19.58■□□□□ 0.73
DDX28-201ENST00000332395 PPP1R11O60927 126 aaPredicted RBP19.58■□□□□ 0.72
DDX28-201ENST00000332395 HDLBPQ00341 1268 aaKnown RBP19.58■□□□□ 0.72
DDX28-201ENST00000332395 SPAG1Q07617 926 aa19.58■□□□□ 0.72
DDX28-201ENST00000332395 KRT31Q15323 416 aa19.58■□□□□ 0.72
DDX28-201ENST00000332395 SYT10Q6XYQ8 523 aa19.58■□□□□ 0.72
DDX28-201ENST00000332395 ADSSL1Q8N142 457 aa19.58■□□□□ 0.72
DDX28-201ENST00000332395 TNS1Q9HBL0 1735 aaKnown RBP19.58■□□□□ 0.72
DDX28-201ENST00000332395 AKR1B15C9JRZ8 316 aaPredicted RBP19.57■□□□□ 0.72
DDX28-201ENST00000332395 ZSCAN12O43309 604 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 RHOBTB3O94955 611 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 SEMA3FQ13275 785 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 SYCP1Q15431 976 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 KCTD1Q719H9 257 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 REXO1L1PQ8IX06 675 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 IDI2Q9BXS1 227 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 RIC8AQ9NPQ8 531 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 FAM198AQ9UFP1 575 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 DDTLA6NHG4 134 aaPredicted RBP19.57■□□□□ 0.72
DDX28-201ENST00000332395 LRRC10BA6NIK2 292 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 CHRNA5P30532 468 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 SLC16A2P36021 539 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 CCT6AP40227 531 aaKnown RBP19.57■□□□□ 0.72
DDX28-201ENST00000332395 NCBP1Q09161 790 aaKnown RBP19.57■□□□□ 0.72
DDX28-201ENST00000332395 MTMR9Q96QG7 549 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 PPP2R2CQ9Y2T4 447 aa19.57■□□□□ 0.72
DDX28-201ENST00000332395 FAM196BA6NMK8 535 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 TXKP42681 527 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 ETF1P62495 437 aaKnown RBP19.56■□□□□ 0.72
DDX28-201ENST00000332395 CALCRLQ16602 461 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 TCP11X2Q5H9J9 407 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 PPFIBP1Q86W92 1011 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 MMTAG2Q9BU76 263 aaKnown RBP19.56■□□□□ 0.72
DDX28-201ENST00000332395 PI4KBQ9UBF8 816 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 KCNJ18B7U540 433 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 USP17L10C9JJH3 530 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 N4BP3O15049 544 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 ZBTB5O15062 677 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 SLC37A4O43826 429 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 EDIL3O43854 480 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 RBL2Q08999 1139 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 KCNJ12Q14500 433 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 GIMAP8Q8ND71 665 aaPredicted RBP19.56■□□□□ 0.72
DDX28-201ENST00000332395 ANKRD20A12PQ8NF67 263 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 MTMR8Q96EF0 704 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 PANX2Q96RD6 677 aa19.56■□□□□ 0.72
DDX28-201ENST00000332395 ITIH6Q6UXX5 1313 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 H7C1D1 291 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 TDP2O95551 362 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 CERKLQ49MI3 558 aaPredicted RBP19.55■□□□□ 0.72
DDX28-201ENST00000332395 SH3BP5LQ7L8J4 393 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 ZSCAN29Q8IWY8 852 aaPredicted RBP19.55■□□□□ 0.72
DDX28-201ENST00000332395 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 TRIM9Q9C026 710 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 SERPINA10Q9UK55 444 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 RGPD3A6NKT7 1758 aaPredicted RBP19.55■□□□□ 0.72
DDX28-201ENST00000332395 RGPD4Q7Z3J3 1758 aa19.55■□□□□ 0.72
DDX28-201ENST00000332395 TRIM49BA6NDI0 452 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 KIF20AO95235 890 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 TNNI2P48788 182 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 COPB1P53618 953 aaKnown RBP19.54■□□□□ 0.72
DDX28-201ENST00000332395 STIM1Q13586 685 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 UBE2SQ16763 222 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 AOC3Q16853 763 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 SHROOM1Q2M3G4 852 aaPredicted RBP19.54■□□□□ 0.72
DDX28-201ENST00000332395 TRIM65Q6PJ69 517 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 CUL5Q93034 780 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 CALML4Q96GE6 196 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 EEF2P13639 858 aaKnown RBP19.54■□□□□ 0.72
DDX28-201ENST00000332395 CLK2P49760 499 aaKnown RBP19.54■□□□□ 0.72
DDX28-201ENST00000332395 FXR2P51116 673 aaKnown RBP eCLIP19.54■□□□□ 0.72
DDX28-201ENST00000332395 TOGARAM2Q6ZUX3 1019 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 C7orf25Q9BPX7 421 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 VPS16Q9H269 839 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 TAB2Q9NYJ8 693 aa19.54■□□□□ 0.72
DDX28-201ENST00000332395 ZNF215Q9UL58 517 aaPredicted RBP19.54■□□□□ 0.72
DDX28-201ENST00000332395 PHLPP2Q6ZVD8 1323 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms