RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 VWA5AO00534 786 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 MMP1P03956 469 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 U2AF2P26368 475 aaKnown RBP eCLIP10.88□□□□□ -0.678e-9■■■■□ 20.1
C11orf54-201ENST00000331239 GJA5P36382 358 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 IKQ13123 557 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 SHCBP1Q8NEM2 672 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 PIGSQ96S52 555 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 FZD1Q9UP38 647 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 CNPY2Q9Y2B0 182 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 CTDP1Q9Y5B0 961 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 SLC25A27O95847 323 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 FOSP01100 380 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 IRX3P78415 501 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 NOGQ13253 232 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 QRICH1Q2TAL8 776 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 RAB11FIP4Q86YS3 637 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 SPICE1Q8N0Z3 855 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 RNF214Q8ND24 703 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 DDX11Q96FC9 970 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 NAP1L4Q99733 375 aaKnown RBP10.88□□□□□ -0.67
C11orf54-201ENST00000331239 RIC8AQ9NPQ8 531 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 PCDHA4Q9UN74 947 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 MTMR6Q9Y217 621 aa10.88□□□□□ -0.67
C11orf54-201ENST00000331239 CCL15-CCL14A0A0B4J2E2 113 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 LOC102724159A0A0B4J2E5 919 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 FAM155AB1AL88 458 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-201ENST00000331239 RAD21O60216 631 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 TRAPPC10P48553 1259 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 PWP2Q15269 919 aaKnown RBP10.87□□□□□ -0.67
C11orf54-201ENST00000331239 CCL15Q16663 113 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 KRT40Q6A162 431 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 GADL1Q6ZQY3 521 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 CHST13Q8NET6 341 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 CFHR5Q9BXR6 569 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-201ENST00000331239 RBBP6Q7Z6E9 1792 aaKnown RBP10.87□□□□□ -0.67
C11orf54-201ENST00000331239 MAP2K2P36507 400 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 UBE2HP62256 183 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 AP3B2Q13367 1082 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 CCDC183Q5T5S1 534 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 WWC2Q6AWC2 1192 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 CCDC84Q86UT8 332 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-201ENST00000331239 CUL5Q93034 780 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 NUP88Q99567 741 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-201ENST00000331239 TEX13BQ9BXU2 312 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 PCDHA1Q9Y5I3 950 aa10.87□□□□□ -0.67
C11orf54-201ENST00000331239 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-201ENST00000331239 KRT2P35908 639 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 FMR1Q06787 632 aaKnown RBP eCLIP10.86□□□□□ -0.67
C11orf54-201ENST00000331239 ZYXQ15942 572 aaKnown RBP10.86□□□□□ -0.67
C11orf54-201ENST00000331239 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 DEFB115Q30KQ5 88 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 BRI3BPQ8WY22 251 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-201ENST00000331239 MORF4L1Q9UBU8 362 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 ABT1Q9ULW3 272 aaKnown RBP10.86□□□□□ -0.67
C11orf54-201ENST00000331239 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 FIBPO43427 364 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 SLC16A2P36021 539 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 ADCY7P51828 1080 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 NAPAP54920 295 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 NLRP5P59047 1200 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 CCNA1P78396 465 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 KRT25Q7Z3Z0 450 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 EHMT1Q9H9B1 1298 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 VAT1LQ9HCJ6 419 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
C11orf54-201ENST00000331239 MTMR7Q9Y216 660 aa10.86□□□□□ -0.67
C11orf54-201ENST00000331239 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
C11orf54-201ENST00000331239 M0R2N6 131 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 BMP15O95972 392 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 HERVK_113P62684 666 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 TREML2Q5T2D2 321 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 HEATR3Q7Z4Q2 680 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 BLIDQ8IZY5 108 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 MROH8Q9H579 483 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 ZNF536O15090 1300 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 MYH15Q9Y2K3 1946 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 COL11A1P12107 1806 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-201ENST00000331239 CEP350Q5VT06 3117 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 SMCO2A6NFE2 343 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 BTBD19C9JJ37 291 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 KIF23Q02241 960 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-201ENST00000331239 CMTR1Q8N1G2 835 aaKnown RBP10.85□□□□□ -0.67
C11orf54-201ENST00000331239 CCDC82Q8N4S0 544 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-201ENST00000331239 CCDC39Q9UFE4 941 aa10.85□□□□□ -0.67
C11orf54-201ENST00000331239 VPS37CA5D8V6 355 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 PDHXO00330 501 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms