RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GUCA1BQ9UMX6 200 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 LAD1O00515 517 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 CYTH3O43739 400 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 TSPY3P0CV98 308 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 TSPY8P0CW00 308 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 AMPD2Q01433 879 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 GPS2Q13227 327 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 GIMAP8Q8ND71 665 aaPredicted RBP17.23■□□□□ 0.35
BRCC3-201ENST00000330045 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 CAPN11Q9UMQ6 739 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 IRS2Q9Y4H2 1338 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 POLRMTO00411 1230 aaKnown RBP17.23■□□□□ 0.35
BRCC3-201ENST00000330045 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
BRCC3-201ENST00000330045 STXBP3O00186 592 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 PRPHP41219 470 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 MCM6Q14566 821 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 ZNF444Q8N0Y2 327 aaPredicted RBP17.22■□□□□ 0.35
BRCC3-201ENST00000330045 TXLNBQ8N3L3 684 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 NOC3LQ8WTT2 800 aaKnown RBP17.22■□□□□ 0.35
BRCC3-201ENST00000330045 ABCB6Q9NP58 842 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 TCP11L1Q9NUJ3 509 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 TRIM10Q9UDY6 481 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 L1RE1Q9UN81 338 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 H3BQF6 201 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
BRCC3-201ENST00000330045 DNM2P50570 870 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 TTI2Q6NXR4 508 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 NEK11Q8NG66 645 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
BRCC3-201ENST00000330045 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
BRCC3-201ENST00000330045 TUBBP07437 444 aa17.21■□□□□ 0.35
BRCC3-201ENST00000330045 VSNL1P62760 191 aa17.21■□□□□ 0.35
BRCC3-201ENST00000330045 GRAPQ13588 217 aa17.21■□□□□ 0.35
BRCC3-201ENST00000330045 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
BRCC3-201ENST00000330045 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
BRCC3-201ENST00000330045 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
BRCC3-201ENST00000330045 CUEDC2Q9H467 287 aa17.21■□□□□ 0.35
BRCC3-201ENST00000330045 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.34
BRCC3-201ENST00000330045 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.34
BRCC3-201ENST00000330045 WDR59Q6PJI9 974 aa17.21■□□□□ 0.34
BRCC3-201ENST00000330045 TUBGCP2Q9BSJ2 902 aa17.21■□□□□ 0.34
BRCC3-201ENST00000330045 GBP3Q9H0R5 595 aa17.21■□□□□ 0.34
BRCC3-201ENST00000330045 ANKIB1Q9P2G1 1089 aa17.21■□□□□ 0.34
BRCC3-201ENST00000330045 STX8Q9UNK0 236 aa17.21■□□□□ 0.34
BRCC3-201ENST00000330045 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
BRCC3-201ENST00000330045 B4DLN1 442 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 PSMD14O00487 310 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 SRGNP10124 158 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 CABP7Q86V35 215 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
BRCC3-201ENST00000330045 CSGALNACT2Q8N6G5 542 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 NOA1Q8NC60 698 aaKnown RBP17.2■□□□□ 0.34
BRCC3-201ENST00000330045 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 LRRC15Q8TF66 581 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 DUSP9Q99956 384 aaKnown RBP17.2■□□□□ 0.34
BRCC3-201ENST00000330045 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 MAGEF1Q9HAY2 307 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 PDE11AQ9HCR9 933 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 EXOC1Q9NV70 894 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 ADAM21Q9UKJ8 722 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 BAG3O95817 575 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 GYS2P54840 703 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 HERVK_113P62684 666 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 KRT83P78385 493 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
BRCC3-201ENST00000330045 AK8Q96MA6 479 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
BRCC3-201ENST00000330045 PLSCR1O15162 318 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 EIF3JO75822 258 aaKnown RBP17.19■□□□□ 0.34
BRCC3-201ENST00000330045 PLCG1P19174 1290 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 MEA1Q16626 185 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 CCDC122Q5T0U0 273 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 SLC44A5Q8NCS7 719 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 RPGRQ92834 1020 aaKnown RBP17.19■□□□□ 0.34
BRCC3-201ENST00000330045 EXOC4Q96A65 974 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 NUP58Q9BVL2 599 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 FLT1P17948 1338 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 BICDL2A1A5D9 508 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 KLRF2D3W0D1 207 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 OR52Z1P0C646 297 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
BRCC3-201ENST00000330045 CCNE1P24864 410 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 GPSM2P81274 684 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 PDE4DQ08499 809 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 P2RX5Q93086 422 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 ZMYND12Q9H0C1 365 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
BRCC3-201ENST00000330045 MYH1P12882 1939 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms