RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SYNRGQ9UMZ2 1314 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 MYADML2A6NDP7 307 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 ALAS1P13196 640 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 Q7L0L9 218 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 ARMCX2Q7L311 632 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 PURBQ96QR8 312 aaKnown RBP17.27■□□□□ 0.36
TSPO-201ENST00000329563 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.36
TSPO-201ENST00000329563 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
TSPO-201ENST00000329563 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 MTMR10Q9NXD2 777 aa17.27■□□□□ 0.36
TSPO-201ENST00000329563 ZHX1Q9UKY1 873 aaPredicted RBP17.27■□□□□ 0.36
TSPO-201ENST00000329563 ZNF213O14771 459 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 SNHG28P0DPA3 235 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 ACVR2BQ13705 512 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 CCSAPQ6IQ19 270 aaPredicted RBP17.26■□□□□ 0.35
TSPO-201ENST00000329563 NUP133Q8WUM0 1156 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 SPC25Q9HBM1 224 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 PDLIM7Q9NR12 457 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 FAM184BQ9ULE4 1060 aa17.26■□□□□ 0.35
TSPO-201ENST00000329563 KDM4AO75164 1064 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 ICAM1P05362 532 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 PCP11498 1178 aaKnown RBP17.25■□□□□ 0.35
TSPO-201ENST00000329563 PTGS1P23219 599 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 ZNF697Q5TEC3 545 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 TTC14Q96N46 770 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 CYP39A1Q9NYL5 469 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
TSPO-201ENST00000329563 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.24■□□□□ 0.35
TSPO-201ENST00000329563 A0A1W2PQ45 241 aaPredicted RBP17.24■□□□□ 0.35
TSPO-201ENST00000329563 A0A1W2PQY0 241 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 MOXD2PA6NHM9 499 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 B4E1Z4 1266 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 POTEB2H3BUK9 544 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 CTAGE5O15320 804 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 CLTBP09497 229 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 GOLGA8HP0CJ92 632 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 TLE2Q04725 743 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 TKFCQ3LXA3 575 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 CCDC144BQ3MJ40 725 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 KLHDC9Q8NEP7 349 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 ESR2Q92731 530 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
TSPO-201ENST00000329563 RNF41Q9H4P4 317 aaPredicted RBP17.24■□□□□ 0.35
TSPO-201ENST00000329563 MROH7Q68CQ1 1323 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 TRIM43BA6NCK2 446 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 DLL1O00548 723 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 NFIBO00712 420 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 PCSK9Q8NBP7 692 aaKnown RBP17.23■□□□□ 0.35
TSPO-201ENST00000329563 BADQ92934 168 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 TRIM43Q96BQ3 446 aaPredicted RBP17.23■□□□□ 0.35
TSPO-201ENST00000329563 STARD7Q9NQZ5 370 aa17.23■□□□□ 0.35
TSPO-201ENST00000329563 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 DUSP11O75319 330 aaKnown RBP17.22■□□□□ 0.35
TSPO-201ENST00000329563 ITGB8P26012 769 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 ACLYP53396 1101 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 NSMFQ6X4W1 530 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 DGKHQ86XP1 1220 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 ENAHQ8N8S7 591 aaPredicted RBP17.22■□□□□ 0.35
TSPO-201ENST00000329563 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 GLT1D1Q96MS3 346 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 TOX2Q96NM4 488 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 UPF3AQ9H1J1 476 aaKnown RBP17.22■□□□□ 0.35
TSPO-201ENST00000329563 ANO2Q9NQ90 1003 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 PDGFCQ9NRA1 345 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 ZSWIM5Q9P217 1185 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 TAF6LQ9Y6J9 622 aa17.22■□□□□ 0.35
TSPO-201ENST00000329563 PQBP1O60828 265 aaKnown RBP17.21■□□□□ 0.35
TSPO-201ENST00000329563 RAG1P15918 1043 aa17.21■□□□□ 0.35
TSPO-201ENST00000329563 PTH1RQ03431 593 aa17.21■□□□□ 0.35
TSPO-201ENST00000329563 KCNA10Q16322 511 aa17.21■□□□□ 0.35
TSPO-201ENST00000329563 SLC30A10Q6XR72 485 aa17.21■□□□□ 0.35
TSPO-201ENST00000329563 ANKS1AQ92625 1134 aa17.21■□□□□ 0.35
TSPO-201ENST00000329563 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
TSPO-201ENST00000329563 KIAA0355O15063 1070 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 CST5P28325 142 aaPredicted RBP17.2■□□□□ 0.34
TSPO-201ENST00000329563 GJA9P57773 515 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
TSPO-201ENST00000329563 BAATQ14032 418 aaPredicted RBP17.2■□□□□ 0.34
TSPO-201ENST00000329563 SHHQ15465 462 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
TSPO-201ENST00000329563 TAPT1Q6NXT6 567 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 ANKRD33Q7Z3H0 272 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 MORC4Q8TE76 937 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 TMEM39AQ9NV64 488 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 GNEQ9Y223 722 aaKnown RBP17.2■□□□□ 0.34
TSPO-201ENST00000329563 ELP1O95163 1332 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 TNKSO95271 1327 aa17.2■□□□□ 0.34
TSPO-201ENST00000329563 ASB14A6NK59 587 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 ASGR1P07306 291 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 C6orf222P0C671 652 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms