RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
CLRN1-203ENST00000328863 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
CLRN1-203ENST00000328863 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
CLRN1-203ENST00000328863 SYNGAP1Q96PV0 1343 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 SGPL1O95470 568 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 CYBAP13498 195 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
CLRN1-203ENST00000328863 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
CLRN1-203ENST00000328863 PSMA5P28066 241 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 TRAF1Q13077 416 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 QRICH1Q2TAL8 776 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 TINF2Q9BSI4 451 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
CLRN1-203ENST00000328863 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
CLRN1-203ENST00000328863 GNAQP50148 359 aa17.23■□□□□ 0.35
CLRN1-203ENST00000328863 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
CLRN1-203ENST00000328863 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
CLRN1-203ENST00000328863 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
CLRN1-203ENST00000328863 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
CLRN1-203ENST00000328863 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
CLRN1-203ENST00000328863 CYP39A1Q9NYL5 469 aa17.23■□□□□ 0.35
CLRN1-203ENST00000328863 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 NFIBO00712 420 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 ZBTB5O15062 677 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 IGHA2P01877 340 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 CASTP20810 708 aaKnown RBP17.22■□□□□ 0.35
CLRN1-203ENST00000328863 CNGA1P29973 690 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 FBXO11Q86XK2 927 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 FAM133AQ8N9E0 248 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 LZTS2Q9BRK4 669 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 SPZ1Q9BXG8 430 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 MAF1Q9H063 256 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 CRISPLD2Q9H0B8 497 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
CLRN1-203ENST00000328863 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
CLRN1-203ENST00000328863 DDX20Q9UHI6 824 aaKnown RBP17.22■□□□□ 0.35
CLRN1-203ENST00000328863 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 FARP2O94887 1054 aaPredicted RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 TFRCP02786 760 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 RCAN1P53805 252 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 EXOSC10Q01780 885 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 APOA5Q6Q788 366 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 MAMDC4Q6UXC1 1216 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 RNF207Q6ZRF8 634 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 ANKLE1Q8NAG6 615 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 MTMR8Q96EF0 704 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
CLRN1-203ENST00000328863 RBM28Q9NW13 759 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
CLRN1-203ENST00000328863 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
CLRN1-203ENST00000328863 ASB14A6NK59 587 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 SEPT4O43236 478 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 ZBTB43O43298 467 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 RXRAP19793 462 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 RPS6KB1P23443 525 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 SLC30A10Q6XR72 485 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 FGD4Q96M96 766 aa17.2■□□□□ 0.34
CLRN1-203ENST00000328863 ZHX1Q9UKY1 873 aaPredicted RBP17.2■□□□□ 0.34
CLRN1-203ENST00000328863 LOC102724159A0A0B4J2E5 919 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 AKR1A1P14550 325 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 CALML3P27482 149 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 SMARCA1P28370 1054 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
CLRN1-203ENST00000328863 PWP2Q15269 919 aaKnown RBP17.19■□□□□ 0.34
CLRN1-203ENST00000328863 RTN1Q16799 776 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 TRPV1Q8NER1 839 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
CLRN1-203ENST00000328863 PIGSQ96S52 555 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.19■□□□□ 0.34
CLRN1-203ENST00000328863 OGDHLQ9ULD0 1010 aa17.19■□□□□ 0.34
CLRN1-203ENST00000328863 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 CYTH3O43739 400 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
CLRN1-203ENST00000328863 CNTN2Q02246 1040 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 Q6ZUG5 572 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 ABHD16BQ9H3Z7 469 aa17.18■□□□□ 0.34
CLRN1-203ENST00000328863 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
CLRN1-203ENST00000328863 NID2Q14112 1375 aa17.17■□□□□ 0.34
CLRN1-203ENST00000328863 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
CLRN1-203ENST00000328863 B4DLN1 442 aa17.17■□□□□ 0.34
CLRN1-203ENST00000328863 PLEKHA8P1O95397 391 aa17.17■□□□□ 0.34
CLRN1-203ENST00000328863 RARBP10826 455 aa17.17■□□□□ 0.34
CLRN1-203ENST00000328863 CPA1P15085 419 aa17.17■□□□□ 0.34
CLRN1-203ENST00000328863 ALDH5A1P51649 535 aaPredicted RBP17.17■□□□□ 0.34
CLRN1-203ENST00000328863 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms