RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 DEXIO95424 95 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 XBP1P17861 261 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 FUT2Q10981 343 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 NTRK3Q16288 839 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 HOMER2Q9NSB8 354 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 KIF3AQ9Y496 699 aa16.26■□□□□ 0.19
CMTM1-201ENST00000328020 PFASO15067 1338 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 SLC15A5A6NIM6 579 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 SCG2P13521 617 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 LBX1P52954 281 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 PRMT2P55345 433 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
CMTM1-201ENST00000328020 PFKFB3Q16875 520 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-201ENST00000328020 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-201ENST00000328020 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 PHKBQ93100 1093 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 MMP19Q99542 508 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 PORCNQ9H237 461 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 EFCC1Q9HA90 598 aa16.25■□□□□ 0.19
CMTM1-201ENST00000328020 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
CMTM1-201ENST00000328020 PEX10O60683 326 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 LARGE1O95461 756 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
CMTM1-201ENST00000328020 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 NUDT12Q9BQG2 462 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 MAP3K20Q9NYL2 800 aaKnown RBP16.24■□□□□ 0.19
CMTM1-201ENST00000328020 RIPK3Q9Y572 518 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 MGAMO43451 1857 aa16.24■□□□□ 0.19
CMTM1-201ENST00000328020 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 K7ELQ4 463 aaPredicted RBP16.23■□□□□ 0.19
CMTM1-201ENST00000328020 PTPREP23469 700 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 NAPAP54920 295 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 BECN1Q14457 450 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 CUL5Q93034 780 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 TRIM47Q96LD4 638 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 PRDM10Q9NQV6 1147 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 BARHL2Q9NY43 387 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
CMTM1-201ENST00000328020 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
CMTM1-201ENST00000328020 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
CMTM1-201ENST00000328020 HSP90AA1P07900 732 aaKnown RBP16.22■□□□□ 0.19
CMTM1-201ENST00000328020 RGS2P41220 211 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
CMTM1-201ENST00000328020 TRIM29Q14134 588 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 GRB14Q14449 540 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 NSMFQ6X4W1 530 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 DPP9Q86TI2 863 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 FAM184AQ8NB25 1140 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 NSUN7Q8NE18 718 aaKnown RBP16.22■□□□□ 0.19
CMTM1-201ENST00000328020 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
CMTM1-201ENST00000328020 DOCK3Q8IZD9 2030 aa16.22■□□□□ 0.19
CMTM1-201ENST00000328020 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 B4DLN1 442 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 GCOM1H8Y6P7 765 aaPredicted RBP16.21■□□□□ 0.19
CMTM1-201ENST00000328020 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
CMTM1-201ENST00000328020 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
CMTM1-201ENST00000328020 POLR2MP0CAP2 368 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 ADORA2AP29274 412 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 GNA11P29992 359 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 RNF207Q6ZRF8 634 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 TRMT44Q8IYL2 757 aaKnown RBP16.21■□□□□ 0.19
CMTM1-201ENST00000328020 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 ARHGAP39Q9C0H5 1083 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 C6orf50Q9HD87 102 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 SRRDQ9UH36 339 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 TRIM17Q9Y577 477 aa16.21■□□□□ 0.19
CMTM1-201ENST00000328020 PLXNB2O15031 1838 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 ZNFX1Q9P2E3 1918 aaKnown RBP16.2■□□□□ 0.18
CMTM1-201ENST00000328020 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 CALML3P27482 149 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
CMTM1-201ENST00000328020 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 MORN1Q5T089 497 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 WWC2Q6AWC2 1192 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 CTU1Q7Z7A3 348 aaKnown RBP16.2■□□□□ 0.18
CMTM1-201ENST00000328020 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 CLEC4DQ8WXI8 215 aa16.2■□□□□ 0.18
CMTM1-201ENST00000328020 GPKOWQ92917 476 aaPredicted RBP eCLIP16.2■□□□□ 0.18
CMTM1-201ENST00000328020 A1CFQ9NQ94 594 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms