RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TTLL12Q14166 644 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-202ENST00000324340 FBXO11Q86XK2 927 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 LINC00301Q8NCQ3 95 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 CLMNQ96JQ2 1002 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 FTOQ9C0B1 505 aaKnown RBP eCLIP14.57□□□□□ -0.08
DDX39A-202ENST00000324340 GLT8D2Q9H1C3 349 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 ELP3Q9H9T3 547 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 FBXO28Q9NVF7 368 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 TMOD4Q9NZQ9 345 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 PPP1R9AQ9ULJ8 1098 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 KCNH4Q9UQ05 1017 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 CLIC4Q9Y696 253 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 MORC2Q9Y6X9 1032 aaPredicted RBP14.57□□□□□ -0.08
DDX39A-202ENST00000324340 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 ITGBL1O95965 494 aaPredicted RBP14.56□□□□□ -0.08
DDX39A-202ENST00000324340 FDX1P10109 184 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 CLK2P49760 499 aaKnown RBP14.56□□□□□ -0.08
DDX39A-202ENST00000324340 ADCY7P51828 1080 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 UBE2HP62256 183 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 PPIL2Q13356 520 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 PTPAQ15257 358 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 ZSCAN23Q3MJ62 389 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 KRT25Q7Z3Z0 450 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 CNKSR2Q8WXI2 1034 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 KIFC2Q96AC6 838 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 TANGO6Q9C0B7 1094 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 ADAMTS5Q9UNA0 930 aa14.56□□□□□ -0.08
DDX39A-202ENST00000324340 MYPNQ86TC9 1320 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 A0A0G2JLL6 359 aaPredicted RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 IRF6O14896 467 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 MBD3O95983 291 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 MRPL12P52815 198 aaKnown RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 SNAP25P60880 206 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 FMR1Q06787 632 aaKnown RBP eCLIP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 SLC39A14Q15043 492 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 UVSSAQ2YD98 709 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 NOM1Q5C9Z4 860 aaKnown RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 LRSAM1Q6UWE0 723 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 CATSPERGQ6ZRH7 1159 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 PIK3AP1Q6ZUJ8 805 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 PRRT2Q7Z6L0 340 aaPredicted RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 REXO1Q8N1G1 1221 aaKnown RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 PROCA1Q8NCQ7 364 aaPredicted RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 KCNG4Q8TDN1 519 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 CUL5Q93034 780 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 SLC38A10Q9HBR0 1119 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.55□□□□□ -0.08
DDX39A-202ENST00000324340 PNMA2Q9UL42 364 aa14.55□□□□□ -0.08
DDX39A-202ENST00000324340 ZNF536O15090 1300 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 TRPM7Q96QT4 1865 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 CCDC194A0A1B0GVG4 234 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 PPP6R2O75170 966 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 GADD45BO75293 160 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-202ENST00000324340 FLOT1O75955 427 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 ICAM1P05362 532 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 CEBPZQ03701 1054 aaKnown RBP14.54□□□□□ -0.08
DDX39A-202ENST00000324340 GPT2Q8TD30 523 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 ZNF526Q8TF50 670 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-202ENST00000324340 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 PSTPIP2Q9H939 334 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 GBA2Q9HCG7 927 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-202ENST00000324340 ABCB11O95342 1321 aa14.54□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L15C9J2P7 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L13C9JLJ4 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L11C9JVI0 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L18D6R9N7 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L22D6RA61 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L17D6RBQ6 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L19D6RCP7 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L20D6RJB6 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 PIK3CDO00329 1044 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 OPLAHO14841 1288 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 SPTLC2O15270 562 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 HOXA7P31268 230 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-202ENST00000324340 USP17L24Q0WX57 530 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 COG2Q14746 738 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 STK38Q15208 465 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 PGBD1Q96JS3 809 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 ZNF408Q9H9D4 720 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 PCDHB6Q9Y5E3 794 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 A0A0G2JMZ2 1700 aa14.53□□□□□ -0.08
DDX39A-202ENST00000324340 VWA5AO00534 786 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 MEIS2O14770 477 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 BMP15O95972 392 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 DSG3P32926 999 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 OAZ1P54368 228 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 NONOQ15233 471 aaKnown RBP eCLIP14.52□□□□□ -0.082e-7■■■□□ 16.3
DDX39A-202ENST00000324340 USH1GQ495M9 461 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 TTC38Q5R3I4 469 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 CCDC174Q6PII3 467 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 C2orf69Q8N8R5 385 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 REPS2Q8NFH8 660 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 RBSNQ9H1K0 784 aa14.52□□□□□ -0.08
DDX39A-202ENST00000324340 BIN2Q9UBW5 565 aaPredicted RBP14.52□□□□□ -0.08
DDX39A-202ENST00000324340 CEP131Q9UPN4 1083 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms