RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CYP26C1Q6V0L0 522 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 NUP88Q99567 741 aaPredicted RBP25.12■■□□□ 1.61
PNKP-201ENST00000322344 C7orf25Q9BPX7 421 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 FAM53CQ9NYF3 392 aa25.12■■□□□ 1.61
PNKP-201ENST00000322344 GTF2IP78347 998 aa25.11■■□□□ 1.61
PNKP-201ENST00000322344 UBXN1Q04323 297 aa25.11■■□□□ 1.61
PNKP-201ENST00000322344 IRF2BP1Q8IU81 584 aa25.11■■□□□ 1.61
PNKP-201ENST00000322344 MAGEC2Q9UBF1 373 aaPredicted RBP25.11■■□□□ 1.61
PNKP-201ENST00000322344 C10orf71Q711Q0 1435 aa25.11■■□□□ 1.61
PNKP-201ENST00000322344 MYO3BQ8WXR4 1341 aa25.11■■□□□ 1.61
PNKP-201ENST00000322344 LGALS16A8MUM7 142 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 TUBB2AQ13885 445 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 KRT222Q8N1A0 295 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 TBCKQ8TEA7 893 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 TRIM47Q96LD4 638 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 TUBB2BQ9BVA1 445 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 VAT1LQ9HCJ6 419 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 BICDL2A1A5D9 508 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 PPP2R3AQ06190 1150 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 SWAP70Q9UH65 585 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 ATP6V0A2Q9Y487 856 aa25.1■■□□□ 1.61
PNKP-201ENST00000322344 IGKV6D-41A0A0C4DH26 115 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 SNHG28P0DPA3 235 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 ZSCAN20P17040 1043 aaPredicted RBP25.09■■□□□ 1.61
PNKP-201ENST00000322344 PPP1R18Q6NYC8 613 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 MB21D1Q8N884 522 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 CALML4Q96GE6 196 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 PLIN2Q99541 437 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 TRIM9Q9C026 710 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 EXOC1Q9NV70 894 aa25.09■■□□□ 1.61
PNKP-201ENST00000322344 TRIM49BA6NDI0 452 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 BMS1Q14692 1282 aaKnown RBP25.08■■□□□ 1.61
PNKP-201ENST00000322344 TTI2Q6NXR4 508 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 CREBRFQ8IUR6 639 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 LZTFL1Q9NQ48 299 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 KRT9P35527 623 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 CLCN6P51797 869 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 ADCY7P51828 1080 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 COBLL1Q53SF7 1204 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 UTP14CQ5TAP6 766 aaKnown RBP25.08■■□□□ 1.61
PNKP-201ENST00000322344 UBA5Q9GZZ9 404 aa25.08■■□□□ 1.61
PNKP-201ENST00000322344 BIN2Q9UBW5 565 aaPredicted RBP25.08■■□□□ 1.61
PNKP-201ENST00000322344 CCNE1P24864 410 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 JAKMIP3Q5VZ66 844 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 FAM114A1Q8IWE2 563 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 LRRC15Q8TF66 581 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 ZMYND15Q9H091 742 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 QSER1Q2KHR3 1735 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 TECP42680 631 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 DNM2P50570 870 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 PMS1P54277 932 aaKnown RBP25.07■■□□□ 1.6
PNKP-201ENST00000322344 ERVK-24P63145 666 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 PDE4DQ08499 809 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 PICALMQ13492 652 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 GPR161Q8N6U8 529 aaKnown RBP25.07■■□□□ 1.6
PNKP-201ENST00000322344 ZNF507Q8TCN5 953 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 ZNF446Q9NWS9 450 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 MYO1AQ9UBC5 1043 aa25.07■■□□□ 1.6
PNKP-201ENST00000322344 HOXA7P31268 230 aaPredicted RBP25.06■■□□□ 1.6
PNKP-201ENST00000322344 FXR2P51116 673 aaKnown RBP eCLIP25.06■■□□□ 1.6
PNKP-201ENST00000322344 ASIC1P78348 528 aa25.06■■□□□ 1.6
PNKP-201ENST00000322344 DMTNQ08495 405 aa25.06■■□□□ 1.6
PNKP-201ENST00000322344 P2RX5Q93086 422 aa25.06■■□□□ 1.6
PNKP-201ENST00000322344 MTMR9Q96QG7 549 aa25.06■■□□□ 1.6
PNKP-201ENST00000322344 PRDM10Q9NQV6 1147 aa25.06■■□□□ 1.6
PNKP-201ENST00000322344 STK17AQ9UEE5 414 aa25.06■■□□□ 1.6
PNKP-201ENST00000322344 TTLL1O95922 423 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 AKR1B1P15121 316 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 GABPB1Q06547 395 aaPredicted RBP25.05■■□□□ 1.6
PNKP-201ENST00000322344 TMEM266Q2M3C6 531 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 CNNM4Q6P4Q7 775 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 DPP8Q6V1X1 898 aaPredicted RBP25.05■■□□□ 1.6
PNKP-201ENST00000322344 RSRC2Q7L4I2 434 aaKnown RBP25.05■■□□□ 1.6
PNKP-201ENST00000322344 MMTAG2Q9BU76 263 aaKnown RBP25.05■■□□□ 1.6
PNKP-201ENST00000322344 RAB34Q9BZG1 259 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 FRMPD2Q68DX3 1309 aaPredicted RBP25.05■■□□□ 1.6
PNKP-201ENST00000322344 CALCRLQ16602 461 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 TMCO3Q6UWJ1 677 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 POTEDQ86YR6 584 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 CSGALNACT2Q8N6G5 542 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 OR8K1Q8NGG5 319 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 ZC3H12CQ9C0D7 883 aaKnown RBP25.05■■□□□ 1.6
PNKP-201ENST00000322344 SERPINB13Q9UIV8 391 aa25.05■■□□□ 1.6
PNKP-201ENST00000322344 RIMBP2O15034 1052 aa25.04■■□□□ 1.6
PNKP-201ENST00000322344 LRRC47Q8N1G4 583 aaKnown RBP25.04■■□□□ 1.6
PNKP-201ENST00000322344 RABGGTAQ92696 567 aa25.04■■□□□ 1.6
PNKP-201ENST00000322344 GOLGA1Q92805 767 aa25.04■■□□□ 1.6
PNKP-201ENST00000322344 DUSP9Q99956 384 aaKnown RBP25.04■■□□□ 1.6
PNKP-201ENST00000322344 TMEM260Q9NX78 707 aa25.04■■□□□ 1.6
PNKP-201ENST00000322344 LUC7L2Q9Y383 392 aaKnown RBP25.04■■□□□ 1.6
PNKP-201ENST00000322344 RNF225M0QZC1 329 aaPredicted RBP25.03■■□□□ 1.6
PNKP-201ENST00000322344 SV2BQ7L1I2 683 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 DNAJC7Q99615 494 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 NUP58Q9BVL2 599 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 LRWD1Q9UFC0 647 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 CAPN11Q9UMQ6 739 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 PNMA6FA0A0J9YX94 578 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 SRGNP10124 158 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 TXKP42681 527 aa25.03■■□□□ 1.6
PNKP-201ENST00000322344 TUBB4BP68371 445 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms