RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 SMPD1P17405 629 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 TMEM63BQ5T3F8 832 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 MKL1Q969V6 931 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 AGBL1Q96MI9 1066 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 AP5M1Q9H0R1 490 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 ACAD9Q9H845 621 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 PDGFCQ9NRA1 345 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 MTMR4Q9NYA4 1195 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 PCDHA11Q9Y5I1 949 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 RFXAPO00287 272 aa23.38■■□□□ 1.33
SSNA1-201ENST00000322310 SKIV2LQ15477 1246 aaKnown RBP23.38■■□□□ 1.33
SSNA1-201ENST00000322310 CHMP4CQ96CF2 233 aa23.38■■□□□ 1.33
SSNA1-201ENST00000322310 EPB41L4AQ9HCS5 686 aaPredicted RBP23.38■■□□□ 1.33
SSNA1-201ENST00000322310 RNF146Q9NTX7 359 aa23.38■■□□□ 1.33
SSNA1-201ENST00000322310 ISY1Q9ULR0 285 aaKnown RBP23.38■■□□□ 1.33
SSNA1-201ENST00000322310 LRRC37A2A6NM11 1700 aa23.38■■□□□ 1.33
SSNA1-201ENST00000322310 TMEM232C9JQI7 657 aa23.37■■□□□ 1.33
SSNA1-201ENST00000322310 BMP3P12645 472 aa23.37■■□□□ 1.33
SSNA1-201ENST00000322310 ATP2A2P16615 1042 aaKnown RBP23.37■■□□□ 1.33
SSNA1-201ENST00000322310 SLFN13Q68D06 897 aa23.37■■□□□ 1.33
SSNA1-201ENST00000322310 EEPD1Q7L9B9 569 aa23.37■■□□□ 1.33
SSNA1-201ENST00000322310 RPUSD2Q8IZ73 545 aaKnown RBP23.37■■□□□ 1.33
SSNA1-201ENST00000322310 ZNF444Q8N0Y2 327 aaPredicted RBP23.37■■□□□ 1.33
SSNA1-201ENST00000322310 GMCL1P1Q8NEA9 526 aa23.37■■□□□ 1.33
SSNA1-201ENST00000322310 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
SSNA1-201ENST00000322310 ZNF536O15090 1300 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 ASB14A6NK59 587 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 TTLL1O95922 423 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 TTLL4Q14679 1199 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 GIMAP6Q6P9H5 292 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 FBXO16Q8IX29 292 aaPredicted RBP23.36■■□□□ 1.33
SSNA1-201ENST00000322310 OSBP2Q969R2 916 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 C1QTNF1Q9BXJ1 281 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 CERS4Q9HA82 394 aa23.36■■□□□ 1.33
SSNA1-201ENST00000322310 TRANK1O15050 2925 aa23.35■■□□□ 1.33
SSNA1-201ENST00000322310 ZEB2O60315 1214 aa23.35■■□□□ 1.33
SSNA1-201ENST00000322310 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
SSNA1-201ENST00000322310 ZBTB40Q9NUA8 1239 aa23.35■■□□□ 1.33
SSNA1-201ENST00000322310 ERC2O15083 957 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 CA3P07451 260 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 TDO2P48775 406 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 STAT2P52630 851 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 AAK1Q2M2I8 961 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 KRT40Q6A162 431 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 TAPT1Q6NXT6 567 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 TRERF1Q96PN7 1200 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 ALDH8A1Q9H2A2 487 aaPredicted RBP23.34■■□□□ 1.33
SSNA1-201ENST00000322310 TRMT13Q9NUP7 481 aaKnown RBP23.34■■□□□ 1.33
SSNA1-201ENST00000322310 SYNPO2Q9UMS6 1093 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 MTCH2Q9Y6C9 303 aa23.34■■□□□ 1.33
SSNA1-201ENST00000322310 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
SSNA1-201ENST00000322310 FDX1P10109 184 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 CYP2C9P11712 490 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 ALAS1P13196 640 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 SNAP25P60880 206 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 IKQ13123 557 aaPredicted RBP23.33■■□□□ 1.33
SSNA1-201ENST00000322310 IQSEC1Q6DN90 963 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 DEFB128Q7Z7B8 93 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 PURBQ96QR8 312 aaKnown RBP23.33■■□□□ 1.33
SSNA1-201ENST00000322310 SEZ6LQ9BYH1 1024 aa23.33■■□□□ 1.33
SSNA1-201ENST00000322310 EPOPA6NHQ4 379 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 GPAA1O43292 621 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 MUM1L1Q5H9M0 696 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 TMEM67Q5HYA8 995 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 APPBP2Q92624 585 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 EPHX3Q9H6B9 360 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 ZNF287Q9HBT7 754 aa23.32■■□□□ 1.32
SSNA1-201ENST00000322310 APPP05067 770 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 TSPY3P0CV98 308 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 TSPY8P0CW00 308 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 KBTBD3Q8NAB2 608 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 NEDD1Q8NHV4 660 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 LRRCC1Q9C099 1032 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 CYP39A1Q9NYL5 469 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 Q9Y3F1 56 aa23.31■■□□□ 1.32
SSNA1-201ENST00000322310 PLIN4Q96Q06 1357 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 M0R2C6 588 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 GTPBP6O43824 516 aaPredicted RBP23.3■■□□□ 1.32
SSNA1-201ENST00000322310 ARHGEF15O94989 841 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 MCCP23508 829 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 HOXD11P31277 338 aaPredicted RBP23.3■■□□□ 1.32
SSNA1-201ENST00000322310 TKFCQ3LXA3 575 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 KIAA1211Q6ZU35 1233 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 KCTD1Q719H9 257 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 RASGRP2Q7LDG7 609 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 FAM160B2Q86V87 743 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 CHURC1Q8WUH1 139 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 STAG1Q8WVM7 1258 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 GMCL1Q96IK5 515 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 DDX19BQ9UMR2 479 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 PRRC2BQ5JSZ5 2229 aaKnown RBP23.3■■□□□ 1.32
SSNA1-201ENST00000322310 TNKSO95271 1327 aa23.3■■□□□ 1.32
SSNA1-201ENST00000322310 PFKMP08237 780 aa23.29■■□□□ 1.32
SSNA1-201ENST00000322310 POU3F3P20264 500 aaPredicted RBP23.29■■□□□ 1.32
SSNA1-201ENST00000322310 SLC1A4P43007 532 aa23.29■■□□□ 1.32
SSNA1-201ENST00000322310 PPP1R13LQ8WUF5 828 aa23.29■■□□□ 1.32
SSNA1-201ENST00000322310 LRFN3Q9BTN0 628 aa23.29■■□□□ 1.32
SSNA1-201ENST00000322310 ECHDC1Q9NTX5 307 aa23.29■■□□□ 1.32
SSNA1-201ENST00000322310 RNF113AO15541 343 aaKnown RBP23.28■■□□□ 1.32
SSNA1-201ENST00000322310 TFAP4Q01664 338 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms