RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CCDC194A0A1B0GVG4 234 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 BICDL2A1A5D9 508 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 TSPY2A6NKD2 308 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 IPO7O95373 1038 aaKnown RBP21.34■■□□□ 1.01
RTN4-201ENST00000317610 CYP2D6P10635 497 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 VAV2P52735 878 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 MECOMQ03112 1051 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 TBC1D8BQ0IIM8 1120 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 SF3B3Q15393 1217 aaKnown RBP21.34■■□□□ 1.01
RTN4-201ENST00000317610 IQCEQ6IPM2 695 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 FAM114A1Q8IWE2 563 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 TAF1P21675 1872 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 FLT1P17948 1338 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 PPP1R2P41236 205 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 MIIPQ5JXC2 388 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 DGKHQ86XP1 1220 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 RASSF8Q8NHQ8 419 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 RUBCNQ92622 972 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 IQCDQ96DY2 449 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 KAT14Q9H8E8 782 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 MINPP1Q9UNW1 487 aa21.34■■□□□ 1.01
RTN4-201ENST00000317610 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
RTN4-201ENST00000317610 PPFIA4O75335 1185 aa21.33■■□□□ 1.01
RTN4-201ENST00000317610 KLK7P49862 253 aa21.33■■□□□ 1.01
RTN4-201ENST00000317610 ITIH3Q06033 890 aa21.33■■□□□ 1.01
RTN4-201ENST00000317610 GRM4Q14833 912 aa21.33■■□□□ 1.01
RTN4-201ENST00000317610 MMGT1Q8N4V1 131 aa21.33■■□□□ 1.01
RTN4-201ENST00000317610 CNOT6LQ96LI5 555 aaKnown RBP21.33■■□□□ 1.01
RTN4-201ENST00000317610 SELENOOQ9BVL4 669 aa21.33■■□□□ 1.01
RTN4-201ENST00000317610 AGPSO00116 658 aa21.33■■□□□ 1
RTN4-201ENST00000317610 MYBL2P10244 700 aa21.33■■□□□ 1
RTN4-201ENST00000317610 HNRNPH3P31942 346 aaKnown RBP21.33■■□□□ 1
RTN4-201ENST00000317610 COBLL1Q53SF7 1204 aa21.33■■□□□ 1
RTN4-201ENST00000317610 AK8Q96MA6 479 aa21.33■■□□□ 1
RTN4-201ENST00000317610 ZNF185O15231 689 aa21.32■■□□□ 1
RTN4-201ENST00000317610 SHOX2O60902 331 aaPredicted RBP21.32■■□□□ 1
RTN4-201ENST00000317610 IDEP14735 1019 aa21.32■■□□□ 1
RTN4-201ENST00000317610 ANKRD40Q6AI12 368 aa21.32■■□□□ 1
RTN4-201ENST00000317610 CAGE1Q8TC20 777 aa21.32■■□□□ 1
RTN4-201ENST00000317610 AENQ8WTP8 325 aaKnown RBP21.32■■□□□ 1
RTN4-201ENST00000317610 SECISBP2LQ93073 1101 aaKnown RBP21.32■■□□□ 1
RTN4-201ENST00000317610 C7orf25Q9BPX7 421 aa21.32■■□□□ 1
RTN4-201ENST00000317610 RSPH14Q9UHP6 348 aa21.32■■□□□ 1
RTN4-201ENST00000317610 NUTM2BA6NNL0 878 aaPredicted RBP21.32■■□□□ 1
RTN4-201ENST00000317610 NUTM2EB1AL46 878 aaPredicted RBP21.32■■□□□ 1
RTN4-201ENST00000317610 GGCXP38435 758 aa21.32■■□□□ 1
RTN4-201ENST00000317610 MAGEA9P43362 315 aa21.32■■□□□ 1
RTN4-201ENST00000317610 GNAQP50148 359 aa21.32■■□□□ 1
RTN4-201ENST00000317610 KIF5AQ12840 1032 aa21.32■■□□□ 1
RTN4-201ENST00000317610 STAG2Q8N3U4 1231 aa21.32■■□□□ 1
RTN4-201ENST00000317610 CRACR2AQ9BSW2 395 aa21.32■■□□□ 1
RTN4-201ENST00000317610 TRIM9Q9C026 710 aa21.32■■□□□ 1
RTN4-201ENST00000317610 SNX12Q9UMY4 172 aa21.32■■□□□ 1
RTN4-201ENST00000317610 DUSP10Q9Y6W6 482 aa21.32■■□□□ 1
RTN4-201ENST00000317610 CCDC88AQ3V6T2 1871 aa21.31■■□□□ 1
RTN4-201ENST00000317610 VGLL3A8MV65 326 aa21.31■■□□□ 1
RTN4-201ENST00000317610 ZNF263O14978 683 aa21.31■■□□□ 1
RTN4-201ENST00000317610 PRLRP16471 622 aa21.31■■□□□ 1
RTN4-201ENST00000317610 INF2Q27J81 1249 aa21.31■■□□□ 1
RTN4-201ENST00000317610 C3orf67Q6ZVT6 689 aa21.31■■□□□ 1
RTN4-201ENST00000317610 PNMA1Q8ND90 353 aa21.31■■□□□ 1
RTN4-201ENST00000317610 CCDC47Q96A33 483 aaKnown RBP21.31■■□□□ 1
RTN4-201ENST00000317610 IL17RBQ9NRM6 502 aa21.31■■□□□ 1
RTN4-201ENST00000317610 JRKLQ9Y4A0 524 aa21.31■■□□□ 1
RTN4-201ENST00000317610 PLCG1P19174 1290 aa21.3■■□□□ 1
RTN4-201ENST00000317610 ATP6V1AP38606 617 aa21.3■■□□□ 1
RTN4-201ENST00000317610 CORO7P57737 925 aa21.3■■□□□ 1
RTN4-201ENST00000317610 SLC35G1Q2M3R5 365 aa21.3■■□□□ 1
RTN4-201ENST00000317610 CREG2Q8IUH2 290 aa21.3■■□□□ 1
RTN4-201ENST00000317610 TRIM58Q8NG06 486 aa21.3■■□□□ 1
RTN4-201ENST00000317610 MAD2L2Q9UI95 211 aa21.3■■□□□ 1
RTN4-201ENST00000317610 FAM184BQ9ULE4 1060 aa21.3■■□□□ 1
RTN4-201ENST00000317610 ROBO1Q9Y6N7 1651 aa21.3■■□□□ 1
RTN4-201ENST00000317610 STXBP3O00186 592 aa21.3■■□□□ 1
RTN4-201ENST00000317610 ZMYND10O75800 440 aa21.3■■□□□ 1
RTN4-201ENST00000317610 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
RTN4-201ENST00000317610 RIN2Q8WYP3 895 aaPredicted RBP21.3■■□□□ 1
RTN4-201ENST00000317610 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
RTN4-201ENST00000317610 PLIN2Q99541 437 aa21.3■■□□□ 1
RTN4-201ENST00000317610 NOC4LQ9BVI4 516 aaKnown RBP21.3■■□□□ 1
RTN4-201ENST00000317610 EFCC1Q9HA90 598 aa21.3■■□□□ 1
RTN4-201ENST00000317610 BARHL2Q9NY43 387 aa21.3■■□□□ 1
RTN4-201ENST00000317610 MTIF2P46199 727 aaKnown RBP21.29■■□□□ 1
RTN4-201ENST00000317610 CYP27A1Q02318 531 aa21.29■■□□□ 1
RTN4-201ENST00000317610 PDE4DQ08499 809 aa21.29■■□□□ 1
RTN4-201ENST00000317610 C2orf54Q08AI8 447 aa21.29■■□□□ 1
RTN4-201ENST00000317610 STK4Q13043 487 aa21.29■■□□□ 1
RTN4-201ENST00000317610 CABP7Q86V35 215 aa21.29■■□□□ 1
RTN4-201ENST00000317610 GSPT2Q8IYD1 628 aaKnown RBP21.29■■□□□ 1
RTN4-201ENST00000317610 JADE2Q9NQC1 790 aa21.29■■□□□ 1
RTN4-201ENST00000317610 PLAGL2Q9UPG8 496 aa21.29■■□□□ 1
RTN4-201ENST00000317610 MACROD2A1Z1Q3 448 aa21.29■■□□□ 1
RTN4-201ENST00000317610 LCA5LO95447 670 aa21.29■■□□□ 1
RTN4-201ENST00000317610 ITPK1Q13572 414 aa21.29■■□□□ 1
RTN4-201ENST00000317610 CCDC70Q6NSX1 233 aa21.29■■□□□ 1
RTN4-201ENST00000317610 SH2D4AQ9H788 454 aa21.29■■□□□ 1
RTN4-201ENST00000317610 LRWD1Q9UFC0 647 aa21.29■■□□□ 1
RTN4-201ENST00000317610 TFAP4Q01664 338 aa21.28■■□□□ 1
RTN4-201ENST00000317610 SPA17Q15506 151 aa21.28■■□□□ 1
RTN4-201ENST00000317610 ERFEQ4G0M1 354 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms