RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 FEZ1Q99689 392 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 ESYT2A0FGR8 921 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 RHOBTB3O94955 611 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 TECP42680 631 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 FILIP1LQ4L180 1135 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 REXO1Q8N1G1 1221 aaKnown RBP23.21■■□□□ 1.31
TTC39C-202ENST00000317571 KCNQ5Q9NR82 932 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 PPP1R11O60927 126 aaPredicted RBP23.2■■□□□ 1.3
TTC39C-202ENST00000317571 NFIAQ12857 509 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 CDC42EP5Q6NZY7 148 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 GPCPD1Q9NPB8 672 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 USP40Q9NVE5 1235 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 PCDHAC2Q9Y5I4 1007 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 ADGRG1Q9Y653 693 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 URI1O94763 535 aaPredicted RBP23.2■■□□□ 1.3
TTC39C-202ENST00000317571 FECHP22830 423 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 APOBEC3HQ6NTF7 200 aaKnown RBP23.2■■□□□ 1.3
TTC39C-202ENST00000317571 ZFPM1Q8IX07 1006 aa23.2■■□□□ 1.3
TTC39C-202ENST00000317571 GIMAP8Q8ND71 665 aaPredicted RBP23.2■■□□□ 1.3
TTC39C-202ENST00000317571 ZC3H12CQ9C0D7 883 aaKnown RBP23.2■■□□□ 1.3
TTC39C-202ENST00000317571 SIPA1L1O43166 1804 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 GNG11P61952 73 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 TTBK2Q6IQ55 1244 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 CREBRFQ8IUR6 639 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 SERPINB13Q9UIV8 391 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 SUGT1Q9Y2Z0 365 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 SLC37A4O43826 429 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 ERVK-24P63145 666 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 ZNF397Q8NF99 534 aaPredicted RBP23.19■■□□□ 1.3
TTC39C-202ENST00000317571 AK8Q96MA6 479 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 TRIM9Q9C026 710 aa23.19■■□□□ 1.3
TTC39C-202ENST00000317571 SHROOM1Q2M3G4 852 aaPredicted RBP23.18■■□□□ 1.3
TTC39C-202ENST00000317571 MTMR9Q96QG7 549 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 JMJD4Q9H9V9 463 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 TDP2O95551 362 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 SPAG1Q07617 926 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 ASPRV1Q53RT3 343 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 TTI2Q6NXR4 508 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 DNAJC18Q9H819 358 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 OGFRQ9NZT2 677 aa23.18■■□□□ 1.3
TTC39C-202ENST00000317571 MYH4Q9Y623 1939 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 NPR1P16066 1061 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 ZNF543Q08ER8 600 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 DUSP9Q99956 384 aaKnown RBP23.17■■□□□ 1.3
TTC39C-202ENST00000317571 GOLGA6L9A6NEM1 432 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 H7C1D1 291 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 UTP14CQ5TAP6 766 aaKnown RBP23.17■■□□□ 1.3
TTC39C-202ENST00000317571 AKT1S1Q96B36 256 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 CARD6Q9BX69 1037 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 ABHD10Q9NUJ1 306 aa23.17■■□□□ 1.3
TTC39C-202ENST00000317571 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
TTC39C-202ENST00000317571 NKRFO15226 690 aaKnown RBP eCLIP23.16■■□□□ 1.3
TTC39C-202ENST00000317571 TTLL1O95922 423 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 ABL1P00519 1130 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 MYL1P05976 194 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 CCDC175P0C221 793 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 FCER1AP12319 257 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 TXKP42681 527 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 STK4Q13043 487 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 ADGRF4Q8IZF3 695 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 HPS3Q969F9 1004 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 EEF2KMTQ96G04 330 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 NAA15Q9BXJ9 866 aaKnown RBP23.16■■□□□ 1.3
TTC39C-202ENST00000317571 SCN9AQ15858 1988 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 TADA3O75528 432 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 CNGA4Q8IV77 575 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 SRRTQ9BXP5 876 aaKnown RBP23.16■■□□□ 1.3
TTC39C-202ENST00000317571 LZTFL1Q9NQ48 299 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 ZNF446Q9NWS9 450 aa23.16■■□□□ 1.3
TTC39C-202ENST00000317571 H2AFXP16104 143 aaPredicted RBP23.15■■□□□ 1.3
TTC39C-202ENST00000317571 SLC16A2P36021 539 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 ADCY7P51828 1080 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 CACNB3P54284 484 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 GRB10Q13322 594 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 UBE2SQ16763 222 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 ACRBPQ8NEB7 543 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 ZNF507Q8TCN5 953 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 PNMA5Q96PV4 448 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 CUEDC2Q9H467 287 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 BLOC1S4Q9NUP1 217 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 DDX41Q9UJV9 622 aaKnown RBP23.15■■□□□ 1.3
TTC39C-202ENST00000317571 C10orf71Q711Q0 1435 aa23.15■■□□□ 1.3
TTC39C-202ENST00000317571 ZNF646O15015 1829 aaPredicted RBP23.14■■□□□ 1.3
TTC39C-202ENST00000317571 FAM196BA6NMK8 535 aa23.14■■□□□ 1.3
TTC39C-202ENST00000317571 C7orf25Q9BPX7 421 aa23.14■■□□□ 1.3
TTC39C-202ENST00000317571 hCG_1984214I3L0E3 225 aa23.14■■□□□ 1.29
TTC39C-202ENST00000317571 CASQ1P31415 396 aa23.14■■□□□ 1.29
TTC39C-202ENST00000317571 MAP3K9P80192 1104 aa23.14■■□□□ 1.29
TTC39C-202ENST00000317571 UBXN1Q04323 297 aa23.14■■□□□ 1.29
TTC39C-202ENST00000317571 ZNF713Q8N859 430 aaPredicted RBP23.14■■□□□ 1.29
TTC39C-202ENST00000317571 NUDT12Q9BQG2 462 aa23.14■■□□□ 1.29
TTC39C-202ENST00000317571 MMP10P09238 476 aa23.13■■□□□ 1.29
TTC39C-202ENST00000317571 PDE4DQ08499 809 aa23.13■■□□□ 1.29
TTC39C-202ENST00000317571 HHIPL2Q6UWX4 724 aa23.13■■□□□ 1.29
TTC39C-202ENST00000317571 KCTD1Q719H9 257 aa23.13■■□□□ 1.29
TTC39C-202ENST00000317571 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
TTC39C-202ENST00000317571 TRIM47Q96LD4 638 aa23.13■■□□□ 1.29
TTC39C-202ENST00000317571 MAGEF1Q9HAY2 307 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms