RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 OFD1O75665 1012 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 PBX1P40424 430 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 CACNB3P54284 484 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 NAPAP54920 295 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 ICA1Q05084 483 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 SPIRE1Q08AE8 756 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 TBX2Q13207 712 aaPredicted RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 ZNF174Q15697 407 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 SLFN13Q68D06 897 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 HEATR3Q7Z4Q2 680 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 REXO1Q8N1G1 1221 aaKnown RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 C12orf42Q96LP6 360 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 SEC63Q9UGP8 760 aaKnown RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 HOOK1Q9UJC3 728 aaKnown RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 FRMPD2Q68DX3 1309 aaPredicted RBP8.15□□□□□ -1.11
NPHP1-201ENST00000316534 SMCHD1A6NHR9 2005 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 SMTNL1A8MU46 457 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 USP17L10C9JJH3 530 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 OR52Z1P0C646 297 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 SLURP2P0DP57 97 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 SREBF1P36956 1147 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 QRICH1Q2TAL8 776 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 B3GNT9Q6UX72 402 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 CNNM3Q8NE01 707 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 HAS1Q92839 578 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 CSRNP1Q96S65 589 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 ADAMTS5Q9UNA0 930 aa8.15□□□□□ -1.11
NPHP1-201ENST00000316534 FECHP22830 423 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 ARID5BQ14865 1188 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 ETNPPLQ8TBG4 499 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 ANP32BQ92688 251 aaKnown RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 WDR18Q9BV38 432 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 TMX1Q9H3N1 280 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 DHX8Q14562 1220 aaKnown RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 SYDE2Q5VT97 1194 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 CUL5Q93034 780 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 CPVLQ9H3G5 476 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 VCPKMTQ9H867 229 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 MAP3K20Q9NYL2 800 aaKnown RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 CCDC194A0A1B0GVG4 234 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 RAD17O75943 681 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 CDC37Q16543 378 aaPredicted RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 ECM1Q16610 540 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 INF2Q27J81 1249 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 ZC3H3Q8IXZ2 948 aaKnown RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 IQUBQ8NA54 791 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 TBCKQ8TEA7 893 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 PNMA5Q96PV4 448 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 UBA5Q9GZZ9 404 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 KIAA1683Q9H0B3 1180 aa8.14□□□□□ -1.11
NPHP1-201ENST00000316534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 BAZ2BQ9UIF8 2168 aaKnown RBP8.14□□□□□ -1.11
NPHP1-201ENST00000316534 ZNF536O15090 1300 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 GH2P01242 217 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 BMP3P12645 472 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 MYL5Q02045 173 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 FAM160B2Q86V87 743 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 PIBF1Q8WXW3 757 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 FBXW7Q969H0 707 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 SDF4Q9BRK5 362 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 FRMD3A2A2Y4 597 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 HSD17B4P51659 736 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 TRAF1Q13077 416 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 INTS13Q9NVM9 706 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 STK17AQ9UEE5 414 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 ZBTB12Q9Y330 459 aaPredicted RBP8.13□□□□□ -1.11
NPHP1-201ENST00000316534 ZNF236Q9UL36 1845 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 IGLV3-22A0A075B6J6 115 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 SLC37A4O43826 429 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 NEMFO60524 1076 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 CTNND1O60716 968 aaKnown RBP8.13□□□□□ -1.11
NPHP1-201ENST00000316534 CD44P16070 742 aaKnown RBP8.13□□□□□ -1.11
NPHP1-201ENST00000316534 MRPL12P52815 198 aaKnown RBP8.13□□□□□ -1.11
NPHP1-201ENST00000316534 FMR1Q06787 632 aaKnown RBP eCLIP8.13□□□□□ -1.11
NPHP1-201ENST00000316534 TCP10Q12799 353 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 GRB10Q13322 594 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 ZNF658Q5TYW1 1059 aaPredicted RBP8.13□□□□□ -1.11
NPHP1-201ENST00000316534 KIAA1524Q8TCG1 905 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 BLOC1S4Q9NUP1 217 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 TMEM260Q9NX78 707 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 FEM1BQ9UK73 627 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 PRR12Q9ULL5 1215 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 ZNF541Q9H0D2 1346 aa8.13□□□□□ -1.11
NPHP1-201ENST00000316534 ZBTB7AO95365 584 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 FOSP01100 380 aaPredicted RBP8.12□□□□□ -1.11
NPHP1-201ENST00000316534 MUTP22033 750 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms