RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 A0A087WWV3 80 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 EYA2O00167 538 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 STXBP3O00186 592 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 DNM1LO00429 736 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 NPTXRO95502 500 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 FGRP09769 529 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 HSPD1P10809 573 aaKnown RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PIP4K2BP78356 416 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 ELF3P78545 371 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 ITIH3Q06033 890 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 TTF1Q15361 905 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PKN1Q16512 942 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 WHAMMP3Q1A5X7 153 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PROSER3Q2NL68 480 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 PABPC1LQ4VXU2 614 aaKnown RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 ANKRD20A8PQ5CZ79 823 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 OLFML1Q6UWY5 402 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 ANKRD13DQ6ZTN6 518 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 SAPCD2Q86UD0 394 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 FERMT3Q86UX7 667 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 LCA5Q86VQ0 697 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 NME8Q8N427 588 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 MLKLQ8NB16 471 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 HDAC7Q8WUI4 952 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 MAIP1Q8WWC4 291 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 WASF1Q92558 559 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 APPBP2Q92624 585 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 USP28Q96RU2 1077 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 CORO1BQ9BR76 489 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 TRPV5Q9NQA5 729 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 TFIP11Q9UBB9 837 aaKnown RBP7.37□□□□□ -1.23
ZNF540-201ENST00000316433 FRMD4BQ9Y2L6 1034 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 L3MBTL1Q9Y468 752 aa7.37□□□□□ -1.23
ZNF540-201ENST00000316433 GPR75-ASB3A0A0A6YYF3 556 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 DPPA5A6NC42 116 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ABL2P42684 1182 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 RHBDL3P58872 404 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 TRIM14Q14142 442 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 KARSQ15046 597 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SLC4A8Q2Y0W8 1093 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SPECC1Q5M775 1068 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 MSL1Q68DK7 614 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SYNE3Q6ZMZ3 975 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 TEX9Q8N6V9 391 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ATP11CQ8NB49 1132 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 CCDC148Q8NFR7 591 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 FOXP1Q9H334 677 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ASB3Q9Y575 518 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 BZW2Q9Y6E2 419 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 PCDH11XQ9BZA7 1347 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 PCDH11YQ9BZA8 1340 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SRRM3A6NNA2 597 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 CEP104O60308 925 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 PCCAP05165 728 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 LSP1P33241 339 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 MYL5Q02045 173 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ADCY1Q08828 1119 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 GBP7Q8N8V2 638 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 NOA1Q8NC60 698 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 HELBQ8NG08 1087 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 L3MBTL3Q96JM7 780 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 BRD8Q9H0E9 1235 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 PREBQ9HCU5 417 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 TLR7Q9NYK1 1049 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ATXN10Q9UBB4 475 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 TUBGCP4Q9UGJ1 667 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ATP8A1Q9Y2Q0 1164 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 GMEB1Q9Y692 573 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 LRRC37AA6NMS7 1700 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 UBN2Q6ZU65 1347 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 DIAPH2O60879 1101 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 DNAJC8O75937 253 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 PENKP01210 267 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SCTRP47872 440 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 AKAP17AQ02040 695 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 CEBPZQ03701 1054 aaKnown RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 BTG3Q14201 252 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-201ENST00000316433 POSTNQ15063 836 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 KIAA0753Q2KHM9 967 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 WASHC4Q2M389 1173 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ANO1Q5XXA6 986 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 TOGARAM2Q6ZUX3 1019 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SLF2Q8IX21 1173 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SAMD3Q8N6K7 520 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 JAKMIP2Q96AA8 810 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 FAM167BQ9BTA0 163 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 OSBPL7Q9BZF2 842 aa7.36□□□□□ -1.23
ZNF540-201ENST00000316433 ABLIM1O14639 778 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 N4BP3O15049 544 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 SPTLC2O15270 562 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 KRT38O76015 456 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 XBP1P17861 261 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 HOXD11P31277 338 aaPredicted RBP7.35□□□□□ -1.23
ZNF540-201ENST00000316433 CA8P35219 290 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 RIPK1Q13546 671 aa7.35□□□□□ -1.23
ZNF540-201ENST00000316433 NTRK3Q16288 839 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms