RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-201ENST00000316097 NID2Q14112 1375 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 CTAGE15A4D2H0 777 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 DEXIO95424 95 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 ABL1P00519 1130 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 CTAGE8P0CG41 777 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 ERCC5P28715 1186 aaPredicted RBP19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 CASP14P31944 242 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 C16orf86Q6ZW13 317 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 USP49Q70CQ1 688 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 CTAGE6Q86UF2 777 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 CTAGE4Q8IX94 777 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 MSL3Q8N5Y2 521 aaKnown RBP19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 PNMA1Q8ND90 353 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 GOLGA8HP0CJ92 632 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 SAFBQ15424 915 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 GOLGA6L1Q8N7Z2 621 aa19.31■□□□□ 0.68
SCAMP4-201ENST00000316097 STK36Q9NRP7 1315 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 FAM196BA6NMK8 535 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 EIF6P56537 245 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 TUBB2AQ13885 445 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 NOM1Q5C9Z4 860 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 STRIP1Q5VSL9 837 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 CTCFLQ8NI51 663 aaPredicted RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 FAM71BQ8TC56 605 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 NAPGQ99747 312 aaPredicted RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 TUBB2BQ9BVA1 445 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 GBP3Q9H0R5 595 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 PCDHB6Q9Y5E3 794 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 SCN9AQ15858 1988 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 RPS6KA5O75582 802 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 MMP1P03956 469 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 AKAP17AQ02040 695 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 TMTC3Q6ZXV5 915 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 NOA1Q8NC60 698 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 TMEM47Q9BQJ4 181 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 ADD3Q9UEY8 706 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 ROBO3Q96MS0 1386 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 LAMB1P07942 1786 aa19.3■□□□□ 0.68
SCAMP4-201ENST00000316097 RAD17O75943 681 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 SPATA1Q5VX52 437 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 FAM205CA6NFA0 338 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 LRRIQ3A6PVS8 624 aaPredicted RBP19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 ADAMTS3O15072 1205 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 DDAH1O94760 285 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 PBX1P40424 430 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 FXR1P51114 621 aaKnown RBP eCLIP19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 TUBB4BP68371 445 aa19.29■□□□□ 0.68
SCAMP4-201ENST00000316097 GYPCP04921 128 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CD44P16070 742 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CASP1P29466 404 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 AFMP43652 599 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 WHAMMP3Q1A5X7 153 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 KANK3Q6NY19 840 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 HHIPL2Q6UWX4 724 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 DGKHQ86XP1 1220 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 ECM29Q5VYK3 1845 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 RCAN1P53805 252 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CNGA4Q8IV77 575 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 SMYD4Q8IYR2 804 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 WASF1Q92558 559 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 RNF26Q9BY78 433 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CSRNP2Q9H175 543 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 FAM204AQ9H8W3 233 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CDK5RAP2Q96SN8 1893 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 EIF3CLB5ME19 914 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 ANKRD65E5RJM6 399 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CALM1P0DP23 149 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CALM2P0DP24 149 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 CALM3P0DP25 149 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 FILIP1LQ4L180 1135 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 EARS2Q5JPH6 523 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 NCAPH2Q6IBW4 605 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 LRRC31Q6UY01 552 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 SPATA20Q8TB22 786 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 EIF3CQ99613 913 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 PLEKHA4Q9H4M7 779 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 NAV1Q8NEY1 1877 aa19.28■□□□□ 0.68
SCAMP4-201ENST00000316097 C10orf71Q711Q0 1435 aa19.27■□□□□ 0.68
SCAMP4-201ENST00000316097 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.68
SCAMP4-201ENST00000316097 SHROOM1Q2M3G4 852 aaPredicted RBP19.27■□□□□ 0.68
SCAMP4-201ENST00000316097 ACBD3Q9H3P7 528 aa19.27■□□□□ 0.68
SCAMP4-201ENST00000316097 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.68
SCAMP4-201ENST00000316097 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.68
SCAMP4-201ENST00000316097 SNED1Q8TER0 1413 aa19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 AKR1B1P15121 316 aa19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 MAGEA9P43362 315 aa19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 R3HDM1Q15032 1099 aaKnown RBP19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 SLC35G1Q2M3R5 365 aa19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 TDRD3Q9H7E2 651 aaKnown RBP19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 SRPRBQ9Y5M8 271 aaKnown RBP19.27■□□□□ 0.67
SCAMP4-201ENST00000316097 CCT6AP40227 531 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms